Pseudomonas versuta: AOC04_17330
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Entry
AOC04_17330 CDS
T04081
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOC04_17330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_17330
Enzymes [BR:
ppsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOC04_17330
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC04_17330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALE89844
UniProt:
A0ABX3E4Q7
LinkDB
All DBs
Position
complement(3863606..3867055)
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AA seq
1149 aa
AA seq
DB search
MPVATSLNAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDDDLGGCGIAAAVDVQLPGSFMWQLYRIVLGSEQIPATSLLDKAPLTWRLMRLLPAL
IDQPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAAGRLQLRNARGE
SPALSPANCWQAELWRALLLDVGEEGMSQSRAGVHQRFMDKINSIEQAPSGLPARVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRHQYKRQARKAGMPAAL
DLDILHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSEVQPLNQLNQL
QDDILELRPLNETRELWPAVDLEQDESIRFHIAHSAQREVEILHDQLLARFAKYPQLQSR
DVIVMVPDIDSYAPHIRAVFGQIERDDRRFIPYTLADQGQRGRDPLLIAIEHLLKLPDSR
FPVSEILDLLDVPALRARFKVQERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPSHLEQNS
WRFGLRRMLLGYAVGSAEACDGIEPYDEIGGLDAVLIGPLVALLDALEIAHQELSQPALP
QQWGERLQALVQLFFLAETEHDDYLLAQLEELRETWLETCELVGLQDALPLTVVREAWLA
GLDQGKLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPACVLIGQLRDHLASGWQLAE
GGDLLEAMTQEHPLQPFSTRYFHEGNSSLFSYAREWQRLHEPQPTPVAPGILAAHEQEEP
LNLTQLQDFLRNPVRHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYTLSDSLLEAALAQ
PDQLEQALHTRALRLQGSGLLPMAGFGECLQQELIEPLPDVLQRYQQLLLLWPTPLNSAL
PVSFEANGLTLEGWLGNLHQRSDKGLLSVTTIPNSIGAIKTRKWHRLTRPWVNHLIACAS
GLDMSTALVASDDTLLLAPLEAKQASEILGNLLMAWKVGMRRPLPVAVKTAFAWLAQSDP
AKADAAAQKAYEGDGQTSDGERRESAALARQFPDYAALMASEEFAEWCDALYRPLFDAPW
RSLNSEASR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgctacgtccctcaatgcgggttttatggtggttcacggtaaccgccttgat
gagttacgcagcttggtcgtgagctggatgcgccgctatcccctggcgcctttggagaac
gaaattgccttggtgcagagtaacggcatcgcccaatggctgaagctggctctggcggaa
gatgcccaggacgacgacctaggtggttgtggcattgctgccgcagttgatgtgcagttg
cccggcagttttatgtggcagctctatcggatcgttttaggcagcgagcaaatccccgcc
acctccctgctcgacaaagctccgcttacctggcgcctgatgcgcttgctcccggcgctt
atcgaccagccgcacttcgaacccttgcagcgcttccttacccatgacactgatttgcgc
aaacgctatcagctgtcagagcgtctggccgacctgtttgaccaatatcaggtttaccgc
gccgactggctggaagattgggccgcaggccgcctccagttacgcaatgcccggggtgaa
agcccggcactgagcccggctaactgctggcaggccgaattgtggcgtgcgttattgctc
gatgtgggtgaggagggcatgtcgcagagtcgggcaggtgttcaccagcgcttcatggac
aagatcaacagcattgagcaagctccgtccggtttaccggccagggtgattgtcttcggc
atttcgtcattgcccgcccaggcgcttgaagccctcgctggccttgcccgtttcagccag
gtgctgttgtgcgtacataatccttgtcgccatcactggtctgacatcgttgcggataaa
gacctgctgcgtcaccaatacaagcgtcaggcgcgcaaggcaggaatgccggcagccctg
gacctggatatcctgcatcaacatgcccatccgcttctcgccgcctggggcaaacaaggg
cgtgattacatcaacctgctcgacagctacgatgaccccaacagttatcgtgcggctttt
cgtgacggccgtatcgacctgttcagtgaagtacaaccgctcaaccagttgaaccagttg
caggatgacattcttgaactgcgcccgctcaacgaaacccgtgagctatggcccgctgta
gatctggagcaggacgagtcaatccgctttcacatcgcccacagtgcacagcgcgaagtc
gaaattcttcacgaccagctactcgcgcgattcgccaagtatccccagttgcagtcacgc
gatgtgattgtgatggtgccggatatcgatagttacgctccccatatacgggcggtattt
ggccagattgaacgagacgaccgtcgtttcatcccctacaccctggccgaccagggtcag
cgtgggcgtgatccgctgctgatcgccatcgagcatctgctcaaactgccggacagccgt
tttccggtcagtgaaattctcgacttgctggatgttccagccctgcgcgcccgcttcaag
gtacaggagcgcgacttgccgaccttgcatcgctggattgaaggcgcagggattcgttgg
ggattgaatgctgagcagcgtgccggcctcggcttgccgtcacacctggaacaaaacagt
tggcgttttggcctgcgccgcatgctgctcggttatgccgtcggtagcgccgaagcctgc
gacggcattgagccgtatgatgaaattggcggtctggatgcggtactgatcggcccgctc
gtggctttgctggatgcactggaaattgcccaccaggaactctcgcagccggcgttgccg
cagcaatggggtgagcggctgcaggcattggtgcaactgtttttcctggccgaaaccgaa
cacgacgattacctgctggcccagctcgaagagcttcgcgagacctggctcgaaacctgt
gagctggttggcctgcaagatgcgttaccgttgacggtagtacgtgaagcctggctggcc
ggacttgaccagggcaagctgtcgcagcgtttcctggccggcgcagtgaacttttgcact
ctgatgccgatgcgggctatcccgttcaagctggtatgcctgctgggcatgaacgatggc
gattacccgcgtgcgcaaccaccgctggatttcgacttgatgggcagcgactatcgcccg
ggcgaccgctcccgccgggaggatgaccgctacctgctgctcgaagcgctgctttctgca
cgcgaccagctctatatcagttgggtcggacgcagtatccgcgacaacagcgagcgtcct
gcctgcgtattgatcggtcagctgcgtgatcacctggccagcggctggcaactggcagag
ggtggcgacttgcttgaagccatgacccaagagcatccgcttcaacccttcagtacccgc
tacttccacgaaggtaattccagcctgttcagctatgcccgggaatggcaacgtctgcac
gagccccagccgacgcctgtcgcgccgggcatcctggcggcgcacgaacaagaagagccc
ttgaacctgacccagttgcaggacttcctgcgtaaccctgtacgtcacttctttagtcag
cgtttgaaagtgttctttgaggcggctgaagtgcctttggcggatgaagaacccttcgtg
ctcgatgcgctacagcgttacacccttagcgacagcttgctcgaagccgcactggcgcag
cctgatcagcttgagcaggctttgcatacccgggccctgcgtttacagggcagtggcctg
ttacccatggccggttttggcgaatgcctgcaacaagaactgatagagccacttcccgat
gtcctacagcgctatcagcaattattgctcctttggccgacgccgcttaacagtgcactg
cccgtcagctttgaggctaacggcctgacccttgaaggctggctcggcaacctgcaccag
cgcagtgacaaaggcttactgtccgttaccactattcctaacagcattggcgcgattaaa
acccgtaaatggcatcggttgacccggccctgggtcaaccacttgattgcctgcgccagt
ggcctggacatgtccacagccttggtcgccagcgatgacaccttgctgctcgcgcctctg
gaggcaaaacaggcgagtgaaattcttggcaatttgctgatggcctggaaagtcggaatg
cgccggccattgcccgttgcagtcaaaacagccttcgcctggcttgcccagtctgatccg
gcgaaagccgatgcggcggcacaaaaagcctacgaaggcgacggccagaccagcgatggc
gagcgtcgtgaaagcgccgcgcttgcccgccagttcccggattacgccgccttgatggcc
agtgaagaatttgcagagtggtgcgatgccctctatcgaccactttttgatgcgccctgg
cgttcattaaacagcgaggcgtcccgctaa
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