Pseudomonas versuta: AOC04_20005
Help
Entry
AOC04_20005 CDS
T04081
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsy03000
]
AOC04_20005
Transcription factors [BR:
ppsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
AOC04_20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ALE90324
UniProt:
A0A0M5LWH0
LinkDB
All DBs
Position
complement(4479568..4480434)
Genome browser
AA seq
288 aa
AA seq
DB search
MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMDVREKLDPVALQR
AVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAATLKPTDVAI
CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTINLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSLKSNDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctgctgcaacatatcgcccagtcacgccacctgttacgtaaatcggaactcaag
gtcgccgatcacgtgctgcttgatcctgcggctgtaatgcacagttccatggctgacctg
gctcacagcgtcggcatcagcgagcctacgatcgtgcgtttttgccgcgcaattggctgt
tccgggtttcaggatctgaagctcaagctggcgcaaagcctggccgccggtgccagtttt
ggtcagtttgcgattcatgaagacgactcggttgctgattacagcctgaaaattttcgac
accacgctgcacaccctgatggacgtgcgcgaaaagctcgacccggtggcgctgcagcga
gccgtgacggcgatgtcgcaagcgcagcgggttgagttctatggttttggtgcgtccggc
gctgtagcggcagatgcccagcacaagtttttccgtctgctgctgaccgctgccgcctac
tctgacccgcacatgcaggcgatgtcggccgcaaccctgaagcccacagacgtggcgatt
tgcatttctcagtccggccgctccaaagacctgctgatcactgccaatctggtgcgtgaa
agtggtgcaagcctgatcactttgtgtccaagccaaacgcccctggcggagctttcgacc
atcaacctggcgatcgacgttcacgaagacaccgaaatctataccccgctgacgtcgcgt
attgctcacctggtggtgattgacgtgctggcgatgggggttgccatggcccgtggcccg
agtctggtcaaccaccttaaaagcgtaaaacgcagccttcgcagtttgcgtctgtcgccc
aaatcgttgaaaagtaacgacgactaa
DBGET
integrated database retrieval system
