Pseudomonas versuta: AOC04_20015
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Entry
AOC04_20015 CDS
T04081
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03420
Nucleotide excision repair
ppsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOC04_20015 (uvrD)
03430 Mismatch repair
AOC04_20015 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_20015 (uvrD)
Enzymes [BR:
ppsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC04_20015 (uvrD)
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC04_20015 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AOC04_20015 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
RHH_1
Motif
Other DBs
NCBI-ProteinID:
ALE90325
UniProt:
A0ABX3EA48
LinkDB
All DBs
Position
4482665..4484848
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVTASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPKHIQASGDLFLSTMRNIYEAYE
AACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSTDFPDAETIRLEQNYRSSAGILKAANALIA
NNTGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLSHSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLIANKALPGRASGAIAGFIELIESLSTKVMEMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFENNDEDEELSPLAAFLGHA
SLEAGDTQAEEHEDGIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMHNLVMTYAETRRLYGAETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
MQSASSLFGGSEIPETEFKLGQLVKHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcttgttaaattccctcaacgatgcccaacgtcaggccgtc
acggccagtgtcgggcgtcagttggttctggccggcgcaggttccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtcccctcactccgtactg
tcggtgacgttcaccaacaaggccgctgccgagatgcgtcaccgcatcgaacagttgatg
ggtattaacccggccggcatgtgggttggcaccttccacggcctggctcaccgcctgttg
cgtgctcactggcaggaggccgggctgagccagaccttccagattctcgacagcgatgac
cagcaacgcttggtcaagcgcgtgattcgtgaactgggccttgatgaacaacgttggccg
gtgcgccaggcgcaatggtttatcaacggccagaaggacgaaggcctgcgccctaaacat
attcaggccagcggcgatttgttcctgtccaccatgcgcaatatttacgaggcctatgag
gccgcgtgccagcgcgcgggagtcatcgacttttccgagttgctgttgcgggccctcgat
ctgtggcgcgataacccggggctgctggcgcattaccaaaagcgtttccgacacattctg
gtggacgaattccaggataccaacgccgttcaatacgcctggctcagactgctggcccaa
ggcggcgacagcctgatggtagtgggcgatgacgaccagtctatttacggctggcgtggc
gccaagattgagaacatctatcagtactcaaccgacttccccgacgctgaaaccattcgt
ctggaacaaaactatcgctccagtgccggtatcctcaaagcggccaacgccctgattgcc
aacaacaccgggcgtatgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aatttgtacgcggccttcaatgagcacgacgaagcacgctatgtagtcgaaaccatcgaa
agcgctctgaaaaccggcctgtcccacagcgatatcgccattttgtaccgctccaacgcc
caatcgcgggtgcttgaagaagccttactgcgcgagcgtattccataccgtatttatggc
ggccagcgatttttcgaacgcgccgagattaaaaacgcgatggcttacatgcgcctgctt
gaaggccgtggcaatgatgcagccctggagcgggtgattaacgttcctgctcgcggtatt
ggcgaaaaaaccgtcgaggccattcgcgagcatgcacgccatagcgatgtgtcgatgtgg
gaagccatgcgccagctcatcgccaacaaagctctgcccggacgcgcttctggcgccatc
gccggttttatcgagctgatcgaaagcctttcgacaaaagtcatggagatgccgctgcat
ctgatgacccagaccgtcatcgagcaaagcgggctgattgcctaccatcaggcggaaaaa
ggcgaaaaaggccaggcccgggtagagaaccttgaggaactggtaagcgcagcccgcaac
ttcgaaaacaatgacgaagacgaggagctgtcgccattggccgcgttcctggggcatgca
tcgctggaagcgggcgacacccaggccgaagagcacgaagacggcattcagctgatgacg
ttgcacagtgccaaaggtctggagttcccgtacgtcttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagccgggccgtcttgaagaggagcgtcgtctg
gcttacgtgggcattacccgggccatgcataacctggtaatgacctacgcggaaacccga
cgcctctacggcgccgagacctacaacaaggtttcgcgtttcgttcgtgaagtgccgaag
gggctgattcaagaggtacggttatccaacagcgtcagccgtccttttggcggcggtcaa
atgcaaagcgccagcagcctgtttggaggttcggagattccggaaacagaattcaaactc
ggccagctggtcaaacatgcggtgttcggtgaaggcgtcatcctcaacttcgagggcgca
ggcgcacaggcgcgggtgcaggtgaacttctccgagggcagcaagtggctgatgatgggc
tacgccaaacttgaagccgtctga
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