Pseudomonas versuta: AOC04_20930
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Entry
AOC04_20930 CDS
T04081
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03030
DNA replication
ppsy03410
Base excision repair
ppsy03420
Nucleotide excision repair
ppsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC04_20930
03410 Base excision repair
AOC04_20930
03420 Nucleotide excision repair
AOC04_20930
03440 Homologous recombination
AOC04_20930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsy03032
]
AOC04_20930
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_20930
Enzymes [BR:
ppsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC04_20930
DNA replication proteins [BR:
ppsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOC04_20930
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOC04_20930
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC04_20930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ALE90503
LinkDB
All DBs
Position
4673125..4675890
Genome browser
AA seq
921 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVMDIEGVKEKFGVSPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVGGGLVDLYEKLDIVPTLPIRGAKNLPAKLEEHREM
AFLSYRLATIKIDVPLDIGLEDLHLKQPDCEKLIELYTELEFKSWIAEVEREAKRAGQVI
VHEEPAPPAEEQQYETILDQARFDVWLKKLNDARLIAFDTETTGLDAQQAQLVGLSFAVK
PGEAAYIPLTHSYMGVPEQLDRDTVLRALKPLLEDPAKAKVGQHAKFDMNILANCAIGGD
QACGIMVQGVAFDTMLESYVLDSTATRHDMDSLALKYLGHGTTSFQDIAGKGVKQLTFDQ
ISLEQAGPYAAEDADVTLRLHHVLHEKLAAIPSLNSVLTDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPIISKTAKGQPS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVTATG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAF
RNDLDVHSATAAEVFGVELNDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
IDRYFARYPGVLDYMERTRTQAAEQGYVETIFGRRLYLPDINAKNPALRKGAERTAINAP
MQGTAADIIKKAMVAVDNWLTASGLDARVILQVHDELVLEVREDLVDEVREQVRSHMSEA
AKLDVPLVVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcatatctgtaccgcgcttttcat
gcgctgccgccgctgactacgtccaaggggttgccgacaggtgccgtgaagggcgtattg
aacatgcttaaaagcctgcgaaaacagtacccggacagtccgtttgcggtggttttcgat
gccaagggcgggacatttcgcgatgagatgttcgccgaatacaaggctaaccgtccaagc
atgcccgacgacatgcgggtccagatcgagcccttgcacgccagcgttatcgcgcttggc
ttccctttgctgtgcgtggaaggtgttgaggctgacgatgtaatcggcaccctggcccgc
agcagcgctgccgcagaccgtccggtagttatttcgacgggcgacaaggacatggcgcaa
ctggtcgacggtcacatcactctggtcaacaccatgaccggcagcgtgatggacatcgag
ggcgtgaaagaaaaatttggcgtctcgcccgagcagatcattgattacctggctctgatg
ggcgattcgtccgataacattccgggcgtcccggggattggtccgaagaccgcgtccggc
ttgctggtcggtgtcggcggtggtctggtcgatttgtacgaaaagctcgatatcgtgccg
accttaccgattcggggggctaaaaatctgccggccaagcttgaagagcatcgggaaatg
gcatttttgtcgtaccggctcgccacgatcaaaattgatgttccactggatatcggcctc
gaagacttgcatctcaaacagccagactgcgaaaagctgattgagctgtacaccgagctg
gaattcaaaagctggattgccgaggttgagcgtgaagccaagcgtgccggccaggtaatt
gttcatgaagagcctgcgccgcctgccgaagaacagcagtacgaaaccatccttgatcag
gcgcgcttcgacgtatggctgaaaaagcttaacgacgccaggctgatagctttcgatact
gaaaccacgggcctggacgcgcagcaggcgcaattggtggggctgtcgtttgcagtcaag
ccgggggaggcggcctacatcccgctgacccactcctacatgggcgtgcctgagcaactg
gatcgcgacacagtactgcgagccctcaagccgttgctcgaagacccggccaaagccaaa
gtgggccagcacgccaagttcgacatgaacatcctggccaactgcgccatcggtggtgat
caggcatgcgggatcatggtgcagggcgtcgcatttgacaccatgcttgaatcctatgtg
ctcgactccacggcgacgcgccacgatatggacagccttgccctcaaatatctgggccat
ggcactaccagcttccaggacattgccggcaagggtgtcaagcagctgacctttgaccag
atctcgctggagcaggccgggccgtatgcggctgaagatgcagacgtgaccctgcgttta
caccatgtgctgcacgagaagctggcagcgatcccaagcctgaacagcgttttgaccgac
attgagatgccgctggtacctgtactggcgcgcattgagcgtcagggtgcgctggtggac
gccaacctgctgggtattcagagcgttgaactgggcgacaagctggtcgcgcttgagcgt
gaggctttcgccatcgcaggcgaagaattcaaccttgggtcccctaagcaattaggcgtg
atcctgtacgaaaagctcgggttgccgattatcagcaaaaccgccaaggggcagccttcg
acggctgaagcggttctggctgaattggccgagcaggacttccctttgcccaaggtactg
atgcagtaccgctcaatgagcaagctgaaaagcacctacaccgatcgcctgcctgagcag
atcaaccctcgtaccggtcggattcatacgtcttaccaccaggctgtcacggcgaccgga
cgcttgtcgtccagtgatccaaacctgcagaacattccaatccgtaccgccgaaggccgt
cggattcgtcaggcgtttgtggcgccaaaaggctacaaactgctggcggcggactactcg
caaatcgagctgcggatcatggcccatctggccaaggacgaaggcttgctgcacgccttc
cgcaacgacctggacgttcacagtgctactgcagccgaggtattcggcgtcgaactgaac
gatgtcactaccgatcagcgtcgtagcgccaaagcgatcaacttcggtctgatctatggc
atgagtgctttcggtctggccaagcagattggtgttgatcgcaaacagtcccaggcttac
atcgaccgttatttcgcgcgctacccgggtgttctggattacatggaacgcacccgtacc
caggcagccgagcaaggctatgtcgagaccatttttggccgtcgcctgtacttgccggac
atcaatgcgaaaaacccggcgctgcgcaaaggcgcagagcggacggcgattaacgccccg
atgcagggcactgctgccgatatcatcaagaaagccatggtggctgtggataactggctg
acggcttctggtctggatgcgcgcgtcattttgcaggtacacgatgaattggtacttgag
gtgcgtgaagacctggtggatgaggtgcgtgaacaggtccgtagccacatgagcgaagcc
gcgaagctcgatgtgccgctggtggtggaagtgggtgtgggcaacaactgggatgaggcg
cactaa
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