Pseudomonas versuta: AOC04_21900
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Entry
AOC04_21900 CDS
T04081
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsy03009
]
AOC04_21900
Enzymes [BR:
ppsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AOC04_21900
Ribosome biogenesis [BR:
ppsy03009
]
Prokaryotic type
rRNA helicases
AOC04_21900
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ALE90691
UniProt:
A0A0M4QM50
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All DBs
Position
complement(4880501..4881886)
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AA seq
461 aa
AA seq
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MTTIATAFNSLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRFFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIG
SLEHGAHIIVGTPGRIQQHLRKGSLKLDGLNTLVLDEADRMLDMGFYDAIEDIIRQTPER
RQTLLFSATYPVGIKQLSSKFMRNPQQVKAEALHTDSQIEQRFYEISPEERMDAVTKVLA
HFRPQSCVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVLNVELARDSEIHIHRVGRTGRAGEKGVAISLVAPSEAHRAQAIE
QLQKAPLNWETLDTLKSQGGAPLLPAMSTLVIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVDRTIAKQAAQRLSEGKIKGRVLRVRVL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccattgccaccgcttttaactctctgcctctgtccgccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcagagcttgccggtgatc
ctcaaaggcatggacctgatcgcccaggcgaagaccggcagcggcaaaactgccgccttc
ggcatcggcctgctgaacccgatcaacccgcgtttcttcggttgccaggccctcgtgatc
tgcccgacccgcgaactggcggaccaggttgccaaagagatccgccgtctggctcgcgcc
gaagacaatatcaaggtgctgaccctgtgtggcggcgtgtccttcggcccgcagatcggc
tcgctggagcacggcgcgcacatcatcgtcggtaccccgggccgcatccagcagcacttg
cgcaaaggctcgctgaaactcgacggtctgaacaccctggtcctcgacgaagccgaccgc
atgctcgacatgggcttctacgatgccatcgaagacatcattcgccagaccccggaacgt
cgtcagaccctgctgttctccgccacctacccggtcggtatcaagcagctgtcgtccaag
ttcatgcgcaacccgcagcaggtaaaagctgaggccttgcacacggacagccagatcgag
cagcgtttctacgaaatctcgcctgaagagcgcatggacgccgtgaccaaagtgctcgcg
catttccgtccgcaatcgtgcgtggccttctgcttcaccaagcagcaggttcaggaaacc
gttgatcacctgacctccaagggtatttccgccgtcggcctgcacggcgacctggaacag
cgcgaccgtgaccaggtgctggcgatgttcgccaaccgctcgacttcggtactggtcgcc
actgacgttgcggcccgtggtctggacatcgatgcactggacatggtgctcaacgtcgag
ctggcccgtgattcggaaatccacattcaccgtgtcggccgtaccggtcgcgctggcgaa
aaaggggtggcgatcagcctggttgctccgtccgaagcgcatcgcgcccaggccatcgag
caactgcagaaagccccgctgaactgggaaaccctggacaccctcaaatcccagggcggc
gcgccattgctgccggccatgagcactctggtgattggtgcaggccgtaaagacaaggtt
cgccccggcgacatccttggcgccctgactggcgacgcgggcatccccggtgcccaggtc
ggcaagatcgcgatctttgacttccaggcctacgtggccgttgaccgcacgattgccaag
caagcggcccagcgcctgagcgaaggtaaaatcaagggccgcgtactgcgcgtccgggtc
ttgtaa
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