Pseudomonas versuta: AOC04_22140
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Entry
AOC04_22140 CDS
T04081
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC04_22140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_22140
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC04_22140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
HTH_17
Sigma70_ECF
Sigma70_r3
HTH_31
HTH_3
PhyR_sigma-like
FaeA
MerR
HTH_Crp_2
HTH_11
HTH_5
PCI
Motif
Other DBs
NCBI-ProteinID:
ALE91121
UniProt:
A0A0M4RLM0
LinkDB
All DBs
Position
complement(4936901..4937419)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQTPHSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGRADLKAPREP
RAFLAAIAKGLLFDYFRRAALEQAYLNELMLIPEAELPSPEEQQLILEDLKAIDRLLGKL
SSKSRAAFLHSRIDGLTHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcagtccaaaccccccacagtgaactggttggagcgctttaccgcgaccatcgc
ggttggctgctggcgtggttgcgacgcaatgtggcctgcccgcaacgggcggaagacttg
agccaggacacctttgtgcgcctgctcggccgcgcagacctcaaggccccccgcgaaccc
cgggcgttcctggctgccattgccaaaggcctgctgtttgattacttccgccgcgccgcc
ctggagcaggcctacctcaacgagctgatgctgatccccgaggccgagctaccctcgcct
gaagaacagcaactgatcctcgaagacctcaaggccatcgaccgcctgctcggcaaactg
tcgagcaagtcccgcgcagccttcctgcatagccgcatcgacggcctgacccacgctgaa
atcgctgaacgcctcggcgtgtcggtgccccgcgtgcgccagtacctggcccagggtatc
cgccagtgctacatcgccctgtatggcgaaccggcatga
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integrated database retrieval system