KEGG   Pseudomonas versuta: AOC04_22140
Entry
AOC04_22140       CDS       T04081                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AOC04_22140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsy03021]
    AOC04_22140
Transcription machinery [BR:ppsy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AOC04_22140
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_24 HTH_17 Sigma70_ECF Sigma70_r3 HTH_31 HTH_3 PhyR_sigma-like FaeA MerR HTH_Crp_2 HTH_11 HTH_5 PCI
Other DBs
NCBI-ProteinID: ALE91121
UniProt: A0A0M4RLM0
LinkDB
Position
complement(4936901..4937419)
AA seq 172 aa
MSSVQTPHSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGRADLKAPREP
RAFLAAIAKGLLFDYFRRAALEQAYLNELMLIPEAELPSPEEQQLILEDLKAIDRLLGKL
SSKSRAAFLHSRIDGLTHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPA
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcgtcagtccaaaccccccacagtgaactggttggagcgctttaccgcgaccatcgc
ggttggctgctggcgtggttgcgacgcaatgtggcctgcccgcaacgggcggaagacttg
agccaggacacctttgtgcgcctgctcggccgcgcagacctcaaggccccccgcgaaccc
cgggcgttcctggctgccattgccaaaggcctgctgtttgattacttccgccgcgccgcc
ctggagcaggcctacctcaacgagctgatgctgatccccgaggccgagctaccctcgcct
gaagaacagcaactgatcctcgaagacctcaaggccatcgaccgcctgctcggcaaactg
tcgagcaagtcccgcgcagccttcctgcatagccgcatcgacggcctgacccacgctgaa
atcgctgaacgcctcggcgtgtcggtgccccgcgtgcgccagtacctggcccagggtatc
cgccagtgctacatcgccctgtatggcgaaccggcatga

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