KEGG   Pseudomonas versuta: AOC04_22300
Entry
AOC04_22300       CDS       T04081                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AOC04_22300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsy03021]
    AOC04_22300
Transcription machinery [BR:ppsy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AOC04_22300
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: ALE90765
UniProt: A0A0M3UF61
LinkDB
Position
complement(4975642..4977489)
AA seq 615 aa
MSGKAQQQSRIKELITLGREQKYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGIPVHES
APDADALMLADADTDEAAAEEAAAALAAVETDIGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEEGIREVMGAIAHFPGTVDHILSEYTRVTTEGGRLSDVLSGYIDPDDGIAPPAAE
VPPPVDPKVKAEGDDEEEEKEESTEEEEEVESGPDPIIAAQRFGAVSDQMEIARKALKKH
GRGSKQAIAELVALAELFMPIKLVPKQFEGLVERVRSALERLRAQERAIMQLCVRDARMP
RTDFLRLFPGNEVDESWSDALAKGKSKYAEAIGRLQPDIIRCQQKLSALEAETGLKIAEI
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELGERMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIDVATVE
SLKEATRDVLSGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPTRSEHLRSFLDE
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtccggaaaagcgcaacagcagtctcgtatcaaagagttgatcaccctcggccgtgag
cagaagtatctgacttacgcagaggtcaacgaccacctgcccgaagatatttcagatccg
gagcaagtggaagacatcatccgcatgattaatgacatggggatccccgtacacgagagt
gctccggatgcggacgcccttatgttggccgatgctgacaccgacgaagcagctgctgaa
gaagcagctgcagcgttggcagcagtagagaccgacattggtcgtactaccgacccagta
cgcatgtatatgcgtgaaatgggcacggtagaactgctgacacgtgaaggcgaaatcgaa
atcgccaagcgtatcgaagaaggcatccgcgaagtgatgggcgcaattgcgcacttccct
ggcacggttgaccatattctctccgagtacactcgcgtcaccaccgaaggtggacgcctg
tccgacgttctgagcggttatatcgacccggacgacggcattgcaccgcctgcagccgaa
gtaccgcctcccgtcgacccaaaggtgaaagccgagggcgatgacgaagaggaagagaag
gaagagtccaccgaggaagaggaagaggtcgaaagcggccctgacccgatcatcgcggct
cagcgtttcggcgctgtttccgatcagatggaaatcgctcgcaaggcactgaaaaagcac
ggtcgcggcagcaagcaagcaattgcagagctggtcgcactggctgagctgttcatgccg
atcaaactggtcccgaagcaattcgaaggcctggttgaacgtgttcgtagcgctctggag
cgtctgcgtgcacaagagcgcgccatcatgcagctgtgtgtacgtgatgcacgcatgccg
cgcaccgacttcttgcgcctgttcccgggcaacgaagttgatgaaagctggagcgacgcg
ctggccaaaggcaaaagcaaatatgctgaagctattggtcgcctgcaaccggacatcatc
cgttgccagcaaaagctgtctgcactggaagctgaaaccggcttgaagattgccgagatc
aaggacatcaaccgtcgcatgtcgatcggtgaggccaaggcccgccgcgcgaagaaagag
atggttgaagccaacttgcgtctggtgatctccattgccaagaagtacaccaaccgtggc
ttgcagttcctcgacttgatccaggaaggcaacatcggcttgatgaaagcggtagacaag
tttgaataccgccgcggctacaaattctcgacttatgccacctggtggatccgtcaggcg
atcactcgctcgatcgccgaccaggcccgcaccatccgtattccggtgcacatgatcgag
acgatcaacaagctcaaccgtatttcccgccagatgctgcaggaaatgggccgtgaaccg
accccggaagagctgggcgaacgcatggaaatgcctgaggataaaatccgcaaggtattg
aagatcgctaaagagccgatctccatggaaaccccgatcggtgatgacgaagactcccat
ctgggcgacttcatcgaagactcgactatgcagtcgccaatcgatgtagccaccgttgag
agccttaaagaagcaacacgcgacgtactctccggcctcaccgcacgtgaagccaaagta
ctgcgcatgcgcttcggtatcgacatgaataccgaccacacccttgaggaggttggtaag
cagttcgacgttacccgtgaacggattcgtcagatcgaagccaaggcgttgcgcaagcta
cgccacccgacgagaagcgagcatctgcgctccttcctcgacgagtga

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