Pseudomonas versuta: AOC04_22300
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Entry
AOC04_22300 CDS
T04081
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AOC04_22300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_22300
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC04_22300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ALE90765
UniProt:
A0A0M3UF61
LinkDB
All DBs
Position
complement(4975642..4977489)
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AA seq
615 aa
AA seq
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MSGKAQQQSRIKELITLGREQKYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGIPVHES
APDADALMLADADTDEAAAEEAAAALAAVETDIGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEEGIREVMGAIAHFPGTVDHILSEYTRVTTEGGRLSDVLSGYIDPDDGIAPPAAE
VPPPVDPKVKAEGDDEEEEKEESTEEEEEVESGPDPIIAAQRFGAVSDQMEIARKALKKH
GRGSKQAIAELVALAELFMPIKLVPKQFEGLVERVRSALERLRAQERAIMQLCVRDARMP
RTDFLRLFPGNEVDESWSDALAKGKSKYAEAIGRLQPDIIRCQQKLSALEAETGLKIAEI
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELGERMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIDVATVE
SLKEATRDVLSGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPTRSEHLRSFLDE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaaagcgcaacagcagtctcgtatcaaagagttgatcaccctcggccgtgag
cagaagtatctgacttacgcagaggtcaacgaccacctgcccgaagatatttcagatccg
gagcaagtggaagacatcatccgcatgattaatgacatggggatccccgtacacgagagt
gctccggatgcggacgcccttatgttggccgatgctgacaccgacgaagcagctgctgaa
gaagcagctgcagcgttggcagcagtagagaccgacattggtcgtactaccgacccagta
cgcatgtatatgcgtgaaatgggcacggtagaactgctgacacgtgaaggcgaaatcgaa
atcgccaagcgtatcgaagaaggcatccgcgaagtgatgggcgcaattgcgcacttccct
ggcacggttgaccatattctctccgagtacactcgcgtcaccaccgaaggtggacgcctg
tccgacgttctgagcggttatatcgacccggacgacggcattgcaccgcctgcagccgaa
gtaccgcctcccgtcgacccaaaggtgaaagccgagggcgatgacgaagaggaagagaag
gaagagtccaccgaggaagaggaagaggtcgaaagcggccctgacccgatcatcgcggct
cagcgtttcggcgctgtttccgatcagatggaaatcgctcgcaaggcactgaaaaagcac
ggtcgcggcagcaagcaagcaattgcagagctggtcgcactggctgagctgttcatgccg
atcaaactggtcccgaagcaattcgaaggcctggttgaacgtgttcgtagcgctctggag
cgtctgcgtgcacaagagcgcgccatcatgcagctgtgtgtacgtgatgcacgcatgccg
cgcaccgacttcttgcgcctgttcccgggcaacgaagttgatgaaagctggagcgacgcg
ctggccaaaggcaaaagcaaatatgctgaagctattggtcgcctgcaaccggacatcatc
cgttgccagcaaaagctgtctgcactggaagctgaaaccggcttgaagattgccgagatc
aaggacatcaaccgtcgcatgtcgatcggtgaggccaaggcccgccgcgcgaagaaagag
atggttgaagccaacttgcgtctggtgatctccattgccaagaagtacaccaaccgtggc
ttgcagttcctcgacttgatccaggaaggcaacatcggcttgatgaaagcggtagacaag
tttgaataccgccgcggctacaaattctcgacttatgccacctggtggatccgtcaggcg
atcactcgctcgatcgccgaccaggcccgcaccatccgtattccggtgcacatgatcgag
acgatcaacaagctcaaccgtatttcccgccagatgctgcaggaaatgggccgtgaaccg
accccggaagagctgggcgaacgcatggaaatgcctgaggataaaatccgcaaggtattg
aagatcgctaaagagccgatctccatggaaaccccgatcggtgatgacgaagactcccat
ctgggcgacttcatcgaagactcgactatgcagtcgccaatcgatgtagccaccgttgag
agccttaaagaagcaacacgcgacgtactctccggcctcaccgcacgtgaagccaaagta
ctgcgcatgcgcttcggtatcgacatgaataccgaccacacccttgaggaggttggtaag
cagttcgacgttacccgtgaacggattcgtcagatcgaagccaaggcgttgcgcaagcta
cgccacccgacgagaagcgagcatctgcgctccttcctcgacgagtga
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