Pseudomonas versuta: AOC04_23055
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Entry
AOC04_23055 CDS
T04081
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsy03000
]
AOC04_23055
Transcription factors [BR:
ppsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
AOC04_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_4
AAA_5
PAS_8
Diguanyl_cycl_sensor
PAS_9
RWP-RK
PAS
AAA_2
HTH_30
AAA
HTH_50
HTH_7
HTH_23
HTH_AraC
nSTAND3
HTH_17
HTH_22
IclR_C
Motif
Other DBs
NCBI-ProteinID:
ALE90904
UniProt:
A0ABX3EG73
LinkDB
All DBs
Position
5121839..5123725
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AA seq
628 aa
AA seq
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MHSNDLSRHARQVLDVTQGRPQGCDPSIVRSWQRCLEDYHLDPAQTIAPTVLEHGRILEG
RERLQQVLQIAGHEMNSLHQQLSGAGHAVLLTDARGVILNCVTAATERKVFERAGLWLGA
DWSEAREGTNGIGTCVVERQALTIHQDEHFRGRHTGLTCSASPVFDPQGELLAVLDVSSA
RHEVSRQSQFHTMALVNLSARIIENSYFLRHFEHQWLLRFHLQAESVGLFSEGMLAFDGD
GVICAVNQSALNLLGHVRGGLLGQTVDSVFDCPRDELFARASTLASTSWPLRTHDGRRLF
AAVRGLPRSVPCAVKPQVEPVAARLSGICLGDEALQTDFRRALRVFERDVPLLINGETGS
GKEAFAKAVHQASLRHGKPFVALNCASIPESLIESELFGYRGGSFTGARKEGMQGKLQQA
DGGTLFLDEIGDMPLVLQTRLLRVLEDRLVVPIGGEPVAVNVRIISATHRNLQERVADGS
FREDLYYRLNGLEIGLPALRDRSDKSQLLDFLLAEEAPQQGLLISPAARQALLEFPWPGN
VRQLRNVLRTLAALCEEQVIEFDDLPVVIRQAPGKAPVPCGQPLENAEKLALLEVLEMHR
WHMTHAAVQLGVSRNTLYRKLRKHGIER
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtaatgatttgagccggcacgcccggcaagttctggatgtgacccagggtcgc
cctcaggggtgtgacccttctatcgttcgctcctggcaacgctgcctggaggactaccac
ctcgatcctgcacagaccattgccccgacagtactggaacacggccgcattcttgaaggg
cgcgagcgtttgcagcaggtgctgcaaattgccgggcacgaaatgaacagcttgcatcag
cagctctcgggggccgggcacgcggtcctgctgaccgatgcccgcggggtcatcctcaac
tgtgtaacggcggcgaccgaacgcaaagtgtttgagcgggccgggctgtggctgggggct
gactggagcgaggcccgcgagggcaccaacgggattggcacctgtgtggtagagcgccag
gctttgaccattcatcaggacgaacattttcgtggccgtcacaccgggctgacctgttcg
gccagcccggtatttgacccgcagggcgagctgctggcggtgctggacgtttcttcggcg
cggcatgaagtctcgcgccagagccagtttcacaccatggcgctggtcaatctctcagcg
cggattatcgaaaacagctattttctgcggcacttcgaacaccagtggctgctgcgtttt
cacctgcaggccgagtcggtggggctgttcagtgaaggcatgctggcattcgacggcgac
ggagttatctgtgccgtgaatcaaagcgccttgaatttgctgggccacgtgcgaggcgga
ttgctcgggcagaccgtcgacagcgtattcgattgcccgcgcgatgaactgttcgcccgt
gccagcaccctggccagcaccagttggccgctgcgtacccacgatggtcgccggctgttt
gcagcggtgcgtggtctgccgcgcagcgtgccgtgcgcggtcaagccgcaggtcgagccc
gtggcggcgcgcttgagcggaatttgcttgggggatgaggccctgcagaccgattttcgt
cgcgcgctgcgggtgttcgagcgtgatgtgccgttattgatcaatggcgaaaccggctcg
ggtaaagaggcctttgccaaggctgtgcatcaggccagcttgcgtcatggcaaaccgttc
gtcgcactcaattgcgcatctatccctgaaagcctgatcgagagtgagctgtttggctat
cgcggtggcagctttaccggggcgcgcaaagaggggatgcagggcaagctgcagcaggct
gatggcggcaccctgtttctggacgagattggcgatatgccgctggtgctgcaaacccgg
ctgttgcgggtgctcgaagatcgcctggtggtgccgatcggtggcgagccggtggcggtc
aatgtgcgcatcatcagtgctacgcatcgcaacttgcaggagcgggtggctgacggcagt
tttcgcgaagacctgtattaccgcctcaatggtcttgaaatcggtttgccggcgttgcgc
gatcgcagtgataagtcgcaactgctcgattttttgctggccgaagaggcgccacagcaa
gggttgctcatcagccctgcggcacgtcaggcgctactggagtttccgtggccgggcaac
gtgcgccagctgcgtaacgtgctgcgtaccctggcggcattgtgtgaagagcaggtgatc
gaatttgatgatctgccggttgtcattcgccaggcgccaggcaaagccccggtcccctgc
gggcagccattggaaaacgcagaaaaactggcgctgctcgaggtgctggaaatgcaccgt
tggcacatgacccacgcggccgtgcagttgggtgttagccgcaatacgctgtatagaaag
ctgcgcaagcacgggatagagcgatag
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