Pseudomonas putida S16: PPS_0349
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Entry
PPS_0349 CDS
T01570
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03030
DNA replication
ppt03430
Mismatch repair
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPS_0349
03430 Mismatch repair
PPS_0349
03440 Homologous recombination
PPS_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppt03032
]
PPS_0349
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_0349
Enzymes [BR:
ppt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPS_0349
DNA replication proteins [BR:
ppt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPS_0349
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPS_0349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF6621
Motif
Other DBs
NCBI-ProteinID:
AEJ10934
LinkDB
All DBs
Position
complement(413350..414060)
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AA seq
236 aa
AA seq
DB search
MSLFAWLRPSAPELDHATRQRLARLPKPAPLGVCTLREQRWVVLDLETSGLNTNRDQVLS
VGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPSALAAGCDPAEALLDLLDFIG
NSPVLAFHAPFDQRMLARALKESLGYRLHSPFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADALVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRKVHNHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgccccagtgcgccggaactggaccacgccacgcgccag
cgcctggcccggctgcccaagccagcgccattgggggtgtgtaccctgcgcgagcaacgc
tgggtggtgctggacctggagaccagcggcctgaacaccaaccgtgaccaggtgctatcg
gttggtgccgtcgccatcgaagacggcgccatcgactttgcccagcagttcgaacgcacc
ttgcaccggcctttgcagaagaccaacgccagcgtgctgatccatggcctgggcccgagt
gccctggctgccggttgcgacccggccgaggccttgctcgacctgctcgacttcattggc
aacagcccggtgctggcattccacgcgccgttcgaccagcgcatgctggcccgtgcgctg
aaggaaagcctgggctatcgcttgcactcgcccttcctggatgttgccgaactggcaccg
atgctcaaccccgacacagtgctgcgcgaggccgggctggatgactgggtcgcgcggttt
ggcctgcaagtcgaggagcgccatcatgccagcgccgatgccctggttaccgccgaactg
gcgctgatcctgttcagccaggcccggcgccagcagctggacagcccgctgcagctggag
cagcgcttgcgcgggtggcgcaggcgcaaggtgcacaaccacggcctgtag
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