Pseudomonas putida S16: PPS_0408
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Entry
PPS_0408 CDS
T01570
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPS_0408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_0408
Transporters [BR:
ppt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PPS_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AEJ10993
LinkDB
All DBs
Position
487238..488272
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AA seq
344 aa
AA seq
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MRKQLKLTALALGLFAAGQAMAADLTVVSFGGANKAAQVKAFYEPWEKAGKGKIVAGEYN
GEMAKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCGV
GFFVWSTVLAYNADKLKTAPTSWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKDV
YQVLGTKEGVDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESN
LKVVWNGGIYDFDAWAIPKGAKDVEEAKKFIAFSVQPEQQKTYSENIAYGPANSKAVSLL
SDDVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFNAWAAKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagcagttgaaactgaccgccctggccctggggctgttcgccgctggccaggcc
atggcagcagacctgactgttgtctcgtttggtggtgccaacaaggcggcccaggtgaag
gcgttctacgaaccgtgggagaaggccggcaagggcaagatcgtcgcaggcgagtacaac
ggcgagatggccaaggtcaaagccatggtcgacaccaagagcgtgtcctggaacctggtg
gaagttgagtcgccagaactggcccgcggctgtgacgagggcatgttcgaagaactcgac
ccggccctgttcggtaatgaggccgactacgtgccgggtgccatccagccatgcggcgtg
ggcttcttcgtatggtccacggtgctggcctacaacgccgacaagctgaagaccgcaccg
accagctgggccgatttctgggataccaagaaattcccgggcaagcgcggcctgcgcaag
ggtgccaagtacaccctggaattcgccctgatggccgacggtgtggcgccgaaggacgtg
taccaggtgctgggcaccaaagagggtgtggaccgcgccttcaagaaacttgacgaactc
aagccaagcatccagtggtgggaagccggcgcccagccgccgcagtacctggcctcgggt
gacgtggtcatgagctctgcctacaacggccgcatcgctgcggtgcagaaagagagcaac
ctgaaggtggtgtggaacggcggcatctacgacttcgatgcctgggccatcccgaaaggt
gccaaggatgttgaggaagcgaagaaattcatcgccttcagcgtgcagcccgagcagcag
aagacctactccgagaacatcgcctatggcccggccaattccaaggccgtgagcctgttg
tcggacgatgtgaagaaggacatgccgaccacgcctgaaaacatcgccaaccaggtgcag
atcgatgtggccttctgggccgacaacagcgagcagctggagcagcgcttcaacgcctgg
gcggcgaagaagtaa
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