KEGG   Pseudomonas putida S16: PPS_0511
Entry
PPS_0511          CDS       T01570                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppt  Pseudomonas putida S16
Pathway
ppt00740  Riboflavin metabolism
ppt01100  Metabolic pathways
ppt01110  Biosynthesis of secondary metabolites
ppt01240  Biosynthesis of cofactors
ppt02024  Quorum sensing
Module
ppt_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PPS_0511
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPS_0511
Enzymes [BR:ppt01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PPS_0511
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PPS_0511
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Phage_Gp84
Other DBs
NCBI-ProteinID: AEJ11096
LinkDB
Position
588371..589507
AA seq 378 aa
MIMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAE
VHALRQAGERARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGL
RRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWIT
GPAARSAVQRLRARSSVVLTSATSVLADNARMTVRGAELGLDAETTALALSRTPLRVLID
GHLRLPLDAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLSALLQALAARSI
NEVLLEAGAGLVGAFARQGLIDEYQLFVAGTFLGSQARPLLDWPLDKMSEAPRLKITEMR
AVGDDWRVTAIPLPAPRV
NT seq 1137 nt   +upstreamnt  +downstreamnt
gtgatcatgcccagccaagctgccatcctcgacgcccactacatggcccgcgcgctggag
ctggcgcgcaagggcctgtacaccacccacccgaacccgcgcgtaggctgcgtgatcgtg
cgcgatggcgaggtggtcggcgaaggctggcatgtacgcgccggcgagccgcatgccgaa
gtgcatgcgctgcgccaggccggtgagcgtgcccgtggcgcctgtgcctatgtcaccctc
gagccgtgcagccatcacggccgcacgccgccgtgcgccgaagcgctggtcaaggcaggc
gtggcacgggtggtagccgccatgcaggaccccaacccgcaagtggcggggcagggcctg
cggcgcctggccgaggccggtatcgaagtggccagcggcgtgctcgaggccgaggcccgc
gcactcaaccccggtttcctcaaacgcatggaacatggcctgccgttcgttcgcgccaag
ctggccatgagcctggatggccgcaccgccatggccagtggcgaaagccagtggatcacc
ggcccggccgcccgttcggcggtgcagcgcctgcgcgcccgctccagcgtggtactgacc
agcgccaccagcgtgttggccgacaacgcgcggatgaccgtgcgcggcgccgagctgggc
ctggatgccgaaaccactgccctggctctcagccgcacaccgctgcgcgtgctgatcgat
ggccacctgcgcctgccgctggatgcgccgttcttccaggctggcccggcgctggtggtg
accgctgtcgcagatgacccgcgctatgccgctgccggccacgaactgctcagcttgccg
ggtgacaatggccaggtagacctgtcggcgttgctgcaggccctggcggcccgcagcatc
aacgaagtcctgctggaagccggtgccggcctggtcggcgccttcgcccggcaaggcctg
atcgacgagtaccaactgttcgtcgccggcactttccttggttcccaggctcgtccgctg
ttggactggccactggacaagatgagcgaagcgccgcggctgaaaattactgaaatgcgc
gcagtgggcgatgactggcgggtcacggccatccccctgccggcaccccgcgtataa

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