Pseudomonas putida S16: PPS_0669
Help
Entry
PPS_0669 CDS
T01570
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
ppt
Pseudomonas putida S16
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_3
PAS_4
PAS_8
GntR
T4_Cef
Motif
Other DBs
NCBI-ProteinID:
AEJ11252
LinkDB
All DBs
Position
complement(764937..768740)
Genome browser
AA seq
1267 aa
AA seq
DB search
MRSAPQAPVASLRGSIKGALALLALILLGLLLWQLFAQFNHTQADLRKQSLDATAELADH
LSLNMALKAQQAVNVVQPYVKAPTPSALPSLLGTLRERLPALQSMAWLDATGQVQADSLA
GSPDRHLLDELLRLNQGSPYFFTNSGDNRTVYLLLRQATEQGRGYWLLRLSPDYYRTLTL
HLDGAGHPLWLLENSRNGEVLQSHAPAVTSNEPLQSVMLAFIDNSTWQLRGLFDAKLAQQ
KLLPALLGKCLLVLFCALLPMLALVNMRRRQRALQDDRRRYQEIFEGTGVALCVLDLSSL
PGQLDRYHLRNRAALKHSLALDPNLRRSLLLELKITEINQVARQLLNIDSHEGAWQRLID
GTGDGRDSIGMQLIDALIEQRPLLELEVRLPAPLGGELHLWLMARLPQQRRDCQAVILSI
SDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVLSQRMIFSNRHLGQTLGYDRTELA
HMGERFWELLLHPEDATHYQALRQQQRDSGHDQPLHCQLRFRHRDGGWRCYDIREQVLTR
DADGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDRLLQLNYVSPSV
QSVLGYQADWIFANGWQSIIANPSQLTGIYSLMERVSKAMGDPAQLAQLRSQLPTQLFLF
DCLRADGRKIPIELRLVLVWDDEERFEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAI
LITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLYQRGSWEG
EMWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHL
PNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMAQRLLAC
VDNDDTVARMGGDEFTLLLQPRATREMALNRAIHVAENILGSLVRPFVLENREFFVTASI
GIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRHAME
QNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGEFIPVIEELGLVVDVGDWVLR
EASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIATILEETGLPPACLELELTESIL
MREVNEAMQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQD
AQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEAQFAN
EKLFMFH
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttccgcgccacaggcgcccgtcgcctcgctgcgcgggtcgatcaagggtgcgctg
gcgctgctggccctgatcctgctgggcctgctgctgtggcagctgttcgcccagttcaac
catacccaggctgacctgcgcaaacagagcctggacgccaccgccgaactggccgaccac
ctgagcctgaacatggccctcaaggcgcaacaggccgtgaatgtggtgcagccctacgtc
aaggcgccgacgccctcggccttgcccagcctgctgggcacccttcgcgagcgcctcccg
gccctgcagagcatggcctggctggacgctaccggccaggtgcaggccgacagcctggcc
ggcagccccgaccgccatttgcttgacgagctgcttaggctgaaccagggcagcccgtac
ttcttcaccaattcgggcgacaaccgcaccgtctacctattgctacgccaggccaccgaa
caaggccgcggctactggctgctgcgcctgtcgccggactactaccgcaccctcaccctc
cacctggatggtgccggccacccgctgtggctgttggaaaacagccgcaacggcgaggta
ctgcaaagccatgcgccggccgttaccagcaacgaaccgctgcaaagcgtgatgctggct
ttcatcgacaacagtacctggcagttgcgcggcctgttcgacgccaagctggcccaacag
aagctgctgccggcgctgctcggcaaatgcctgctggtgctgttctgcgccctgctgccg
atgctggccctggtcaacatgcgccgccgccaacgggcgctgcaggacgaccgccggcgc
tatcaggaaattttcgaaggcaccggcgtggccttgtgtgtgctcgacctgtccagcctg
cccggccaactcgaccgttaccacctgcgcaaccgtgccgcgctcaaacacagcctggcc
ctggaccccaacctgcgccgctcgctgctgctggagctgaagatcaccgagatcaaccag
gtggcccgccaactgttgaacatcgacagccacgaaggtgcctggcagcgcctgatcgat
ggcactggcgatggccgcgacagcatcggcatgcaactgatcgacgcgctgatcgagcag
cgcccgctgctggagctggaggtgcgcctgccggcgccgctgggtggcgagttgcacctg
tggctgatggcccgcctgccgcagcagcgccgcgactgccaggcggtcatcctcagcatc
agcgacatcaccagccgcaagcaggtggagctgtcgctgctggagcgtgagagcttctgg
tcggacgtggtgcgcacggtgcccgaccagttgtatgtgcaggacgtgctcagccagcgc
atgatcttcagtaaccgccacctcggccagaccctgggctacgaccgtaccgagctggcg
catatgggcgagcgcttctgggagctgctgctgcaccccgaggatgccacgcactaccag
gcgctgcgccagcaacagcgcgacagcggccatgaccagccgctgcactgccagctgcgt
ttccgccaccgtgatggcggctggcgctgctacgacatccgcgaacaagtgctgacccgt
gacgccgacggcctggtgacacgcatcatcggcgtgggtaaggacgtgacggtgcagatc
gaggccagccagtcgctgcgcgacagcgaacagcgctaccgcatgctcgccgaaagcatc
agcgacgtgatcttctctaccgacaggctgctccagctcaactacgtaagcccctcggtg
caaagcgtgctgggctaccaggccgactggatcttcgccaacggctggcagtcgatcatc
gccaacccgtcccagctcaccggcatctatagcctgatggagcgcgtcagcaaggccatg
ggcgacccggcccagcttgcccagctacgcagccagctgcccacccagctgttccttttc
gactgcctgcgcgccgatggccgcaagatccccatcgaactgcgcctggtgctggtgtgg
gacgatgaagagcgcttcgaaggcgtgctcggggttggccgcgacatcagccagcaacgc
cgtgccgagaaagacctgcgcatggccgcgacggtattcgagcactccacctcggccatc
ctcatcaccgacccggcgggctatatcgtccaggccaacgaagcgttcagccgcgtcagt
ggctacgccgtcagcgaggtgctcgaccagttgccgggcatgcttaccgtcgacgagcag
caggaaggccacctgcgctacgtggtgaagcagctttaccagcgcggcagctgggagggc
gaaatgtggctcaagcgccgcgacggcgaccactacccggcctgggtcggcattaccgca
gtgctggacgacgaaggcgacctggccagctacgtgtgtttcttcaccgacatcagcgag
cgcaaggccagcgaacagcgcatccaccgcctggcctactacgacgccctcacccacctg
cccaaccgcacgttgttccaggaccgtctgtacaacgccctgcagcaggccgagcggcaa
aaggcctgggtggtgctgatgttcctcgacctggaccgcttcaagccgatcaacgactcc
ctcggccacgctgccggcgaccgcatgctcaaggacatggcccagcgcctgctggcctgt
gtggacaacgacgacaccgtggcgcgcatgggcggcgacgagttcaccctgctgctgcaa
ccgcgcgctacccgtgaaatggcactcaaccgcgccatccacgtggccgagaacatcctc
ggcagcctggtgcggccgttcgtgctggaaaaccgcgagttcttcgttaccgcaagtatc
ggcatcgccctcagcccgcaggacggcagcgagctgagccagctgatgaaaaacgccgac
accgccatgtaccacgccaaggagcgcggcaagaacaacttccagttctaccaggcggag
atgaacgccagcgctctggaacgcctggagctggagagcgacctgcgccatgccatggag
cagaacgagttcatcctctactaccagccgcagttcagtggcgacggcaagcgcctgacc
ggcgcagaagccctgctgcgctggcgccacccgacccgcggcctggtcccgccgggcgaa
ttcatcccggtgatcgaagaactgggcctggtggtggacgtgggcgactgggtgctgcgc
gaggccagccgccagctcaaggcctggcacaaggccaaggtgcgcgtgcccaaggtgtcg
gtgaacatctcggcgcggcagttctccgacggccagctgggcacgcgcatcgccaccatt
ctggaagaaaccggcctgccaccggcgtgcctggagctggagctgaccgaaagcatcctg
atgcgcgaagtgaacgaagccatgcagattctcgccagcctgaaaaacctcggcctgagc
atcgcggtggacgacttcggcaccggttactcgtcgctgaactacctcaagcagttcccg
atcgatgtgttgaagatcgaccgcaccttcgtcgacggcctgcctgaaggcgagcaggat
gcgcagattgcccgagcgatcatcgccatggcccacagcctcaacctggcggtgatcgcc
gaaggggtggagacccacgagcagctggagttcctgcgcgagcatggttgcgacgaggtg
cagggctacctgttcgggcggccgatgccggcgcatcagttcgaggcgcagttcgccaac
gagaagctcttcatgttccattga
DBGET
integrated database retrieval system
