Pseudomonas putida S16: PPS_0948
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Entry
PPS_0948 CDS
T01570
Name
(GenBank) extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02010
ABC transporters
ppt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPS_0948
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPS_0948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_0948
Transporters [BR:
ppt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPS_0948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
PDDEXK_2
Motif
Other DBs
NCBI-ProteinID:
AEJ11527
LinkDB
All DBs
Position
complement(1060411..1062006)
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AA seq
531 aa
AA seq
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MKSLPLRLALAALVLGSATQLAAKPLVVCTEASPEGFDVVQYTTGVTFDATSEALFNRLV
DFKPGTTDVQPALAERWDISPDGLTYTFHLRQGVKFHKTDYFTPTREFNADDVLWSLRRQ
LDPAHPWHDKTSVGYPYFESMSFKSLLKSVDKTDDHTVVITLTRPEAPFLRDMAMGFTSI
YSAEYGDQLLKAGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALIFA
IATDSNVRLQKLRANECQVALYPKPEDVPTIKADPKLKVAETEALVTGYIAMNTQHKYLS
DVRVRKAINMAFDRQTHVDQLFGKDNALVGVNPYPPTMLGYNTTNQNPPRDLAKARALLK
EAGVPEGTVITLFTRNGGGMTNPNPRLSAEMLQADLKQVGLKLDIRVMEWAEMLRRAKNG
EADLVSTGWAGDNGDPDNFLTPLLSCEAAKNGENYARWCNPQFQELITRARQMTDDNERR
WVYAEALRVYDDDQPWISMAHPKVFAAMRDNVEGYVISPLANNNFATTKVK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctaccgctacgcctcgccctggcagcgctggtactgggtagcgccacgcaa
ctggcggccaagccgctggtagtgtgcaccgaggccagcccggaagggttcgacgttgtc
cagtacactacgggggtcaccttcgatgccacctccgaagcgctgttcaaccgcctggtc
gacttcaagcccggtaccaccgatgtccagccggccctggccgaacgctgggacatctca
ccggacggcctgacctacaccttccacctgcgccaaggggtgaagttccacaagaccgac
tacttcacgcccactcgcgaattcaatgccgatgacgtgctgtggagcctgcgccgtcag
ctcgacccggcgcacccgtggcacgacaagaccagcgtcggctacccgtacttcgaaagc
atgtccttcaaaagcctgctcaagtcggtggacaagaccgatgaccacaccgtggtgatc
accctcactcgcccggaagcaccgttcctgcgggacatggccatgggcttcacctcgatc
tactccgccgaatacggcgaccagttgctcaaggccggcaagaccgccgagctgaacagc
aagccgatcggcactggcccgttcatcttccagcgttacaacaaggacgcccaggtccgc
ttcaaacccaacccggactacttccgcggcaagcccccggccgacgccctgatattcgcc
atcgccaccgacagcaacgtgcgcctgcaaaagctgcgcgccaacgaatgccaggtggcg
ctgtaccccaaaccggaggacgtgccgacgatcaaggccgaccccaagctcaaggtcgcc
gagaccgaagcgctggttaccggctatatcgccatgaacacccagcacaagtacctcagc
gatgtgcgcgtgcgcaaagccatcaacatggccttcgaccgccagacacacgtcgaccag
ctgtttggcaaggacaacgcgctggtgggcgtgaacccgtacccgccgaccatgctcggt
tacaataccaccaaccagaacccgcctcgggacctggccaaggcccgcgccctgctcaag
gaagctggcgtaccggaaggtaccgtgatcaccctgttcacccgcaacggcggcggcatg
accaaccccaacccacgcctgtccgccgagatgctgcaggccgacctgaaacaggtcggc
ctgaagctggatatccgcgtgatggaatgggccgaaatgctgcgtcgtgccaagaacggc
gaagccgacctggtctccaccggctgggcaggcgacaacggtgacccggacaacttcctc
accccactgctcagctgcgaggccgccaagaacggcgagaactacgcccgctggtgcaat
ccgcagttccaggaactcatcacgcgcgcacggcagatgacggatgacaatgagcgccga
tgggtctatgccgaggctttaagggtgtacgatgacgaccaaccctggatcagcatggcc
caccccaaggtgttcgccgccatgcgtgacaacgtggagggctacgtgatcagccctctg
gccaacaacaacttcgccaccaccaaggtgaagtag
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