Pseudomonas putida S16: PPS_1213
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Entry
PPS_1213 CDS
T01570
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppt03016
]
PPS_1213
Enzymes [BR:
ppt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PPS_1213
Transfer RNA biogenesis [BR:
ppt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPS_1213
Prokaryotic type
PPS_1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEJ11788
LinkDB
All DBs
Position
1356108..1357166
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRTISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLEQLKQYGVPNYFGTQRFGHGGGNVHDALDW
AARNALPEQRNVRSRLLSAGRSYLFNQVLAARVADGSWARAQVGDLLAFTTSRSFFPAGE
SECSDPRLAILDLHPTGPLWGAGDSPATGSTAQQEDAIAARQPALCQWLALAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREIVDLVSAGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgttgggcccgcgtgcatcgggcgaaccactgggtaccgccgtt
ctcaaggcagtggccgaagatttccaagtcgacgaagtgctggacatcccgctgtcggga
cagggcgagcacttgtggctgtgggtcgaaaagcgtgacctgaacaccgaggaggcggcc
cgccgcctggcccgtgccgcaggggtgccggtgcgcacgatcagctacgccggcctcaag
gaccgccaggccctgacccgccagtggttcagcctgcacctgcccggcaaggccgacccg
gacctgtcgcgtgccgaggatgccagcctgcgtgtgctcaagcaggtgcgccaccagcgc
aagctgcagcgcggtgcgcattcggccaatggcttcacgctgcgcctgactgccctggct
gccgatcaccaagcggtggatgcgcgcctggaacagctcaagcagtacggtgtgccgaat
tatttcggcacccagcgcttcggccacggtggcggcaacgttcacgacgctcttgattgg
gccgcacgcaatgccctgcccgaacagcgcaacgtgcgttcgcggttgctctcggccggg
cgcagctacctgttcaaccaggtgctggcagcccgtgttgccgacggcagctgggcgcgt
gcgcaggtgggcgacctgttggcgttcaccacgagtcgtagcttctttcctgctggggag
tcggaatgttccgatcctcggctggcgattcttgacctgcatccgaccggcccgctgtgg
ggggcaggcgattcgccggctacggggagtactgcgcaacaagaggatgcgatcgccgca
cggcagccggcactttgccagtggctggccctggcgggcatggatcacgaacgacgcatt
ctgcggctccctattggcggtcttacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgtttcgccaccgtggtggtgcgcgaaatcgtggatctg
gtgtcggcggggcagacggacagctcatgcgtattctga
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