Pseudomonas putida S16: PPS_1217
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Entry
PPS_1217 CDS
T01570
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppt03021
]
PPS_1217
Transcription machinery [BR:
ppt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPS_1217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AEJ11792
LinkDB
All DBs
Position
1359761..1360768
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AA seq
335 aa
AA seq
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MALSKEVPEFDIDDDLLLMETGIVLETDVVSDEPAVSSVRTRAKSGSSLKQHKYIDYSRA
LDATQLYLNEIGFSPLLSPEEEVHFARLSQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSPEEIATLLEKPVAEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLGELTDKQREVVVRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagtgccggagtttgacatcgacgatgacctgcttctgatggag
acgggtatcgttttggaaacggatgtggtgtcagacgaacctgctgtatcttcggttcgg
acgagggccaagtcgggctcttcgctcaagcaacacaagtacatcgattacagccgggcg
ctcgatgccacccagttgtatctcaacgagataggattctcgcctctgctttcgccggaa
gaggaagtgcactttgcgcgcctgtcgcaaaagggcgaccctgccggccgcaagcgcatg
atcgaaagcaacctgcgcctggttgtaaaaattgcccgtcgttacgtgaaccgcggcctg
tcgctgctcgacctgatcgaggagggcaaccttgggctgatccgtgcggtcgagaagttc
gacccggagcgtggtttccggttctcgacttatgcgacctggtggattcgccagaccatc
gaacgggcgatcatgaaccagacccgcaccattcgcctgccgatccacgtggtcaaggaa
ctgaacgtctacctgcgcgctgcgcgcgagctgacccagaaactggaccacgaaccctcg
ccagaagaaatagccacgctgctggagaagccggtcgccgaggtcaagcgtatgctgggc
ctgaacgagcgggtgtcttcggtggatgtgtcgctcggcccagactcggacaagaccctg
ctcgataccttgaccgacgaccgcccgaccgacccatgcgaactgctgcaggatgatgac
ctgtcgcagagtatcgaccagtggctgggcgagttgaccgacaagcagcgtgaagtggtg
gtgcgccgctttggcttgcgcgggcatgaaagcagcaccctggaagatgttggactggag
attggcctgacccgcgaacgggtgcggcagatccaggtcgaggggctcaagcgtttgcgt
gagattctcgagaagaacggcctgtccagtgagtcgttgttccagtag
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