Pseudomonas putida S16: PPS_1641
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Entry
PPS_1641 CDS
T01570
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00300
Lysine biosynthesis
ppt00470
D-Amino acid metabolism
ppt01100
Metabolic pathways
ppt01110
Biosynthesis of secondary metabolites
ppt01120
Microbial metabolism in diverse environments
ppt01230
Biosynthesis of amino acids
Module
ppt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPS_1641
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPS_1641
Enzymes [BR:
ppt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PPS_1641
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEJ12214
LinkDB
All DBs
Position
complement(1832251..1833498)
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AA seq
415 aa
AA seq
DB search
MSSAAMTAPFTLLAEAVRQHGSPLWAYDAGTIAERVEQLKVFDTVRFAQKANPNLHVLRL
MRAHGLVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSI
DMLRQLGERSPGHRVWVRINPGFGHGHSRKTNTGGENSKHGIWHEELGEALACVKAHGLH
LVGVHMHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSSDTPVDLQRY
ARTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFND
LMRPAMYGAYHRMTLLDADGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPHDLPQAQV
GDLLVIHDAGAYGASMSSNYNSRPLLPEFLIEDGALRMIRRRQTVQDLLGLEAGF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgccgccatgactgcacccttcactcttctggccgaggctgtccgccagcac
ggctcgccgctgtgggcctatgacgccggcaccatcgccgagcgtgtcgaacagctgaag
gtgttcgacaccgtgcgcttcgcccagaaggccaaccccaacctgcatgtgctgcgcctg
atgcgcgcccacggcctggtgctggacgcagtgtcgctgggcgaaatggagcgggccttt
gccgcgggcgccagcgtggatggcgaccctgccggcgtggtgctgacctgcgacgcactg
gaccggccgaccctggagcgggtggtggcctcgaagatcgaagtcaacgccggctccatc
gacatgctgcgccaactgggtgaacgctcgcccggccaccgcgtgtgggtccgcatcaac
cccggcttcggccatggccacagccgcaagaccaacaccggcggcgagaacagcaagcac
ggcatctggcacgaagagctgggcgaagcgctggcctgcgtgaaagcccatggcctgcac
ctggtaggggtgcacatgcacatcggctcgggggtggattaccagcacctggagcaagtg
gcccgctcgatgatcgagctgatcggccgcctgggcgtggacatcgaggcgttctccatt
ggcggcgggctttccaccccgtaccgcagcagcgacacgccggtcgacctgcaacgctac
gcccggacctgggccgtggcccgcaaggaaatcgaagcgatgctgggccaccccgtgcgc
atggagatcgagccggggcgcttcctggtggcggaatcgggctacctggtggccgaggta
cgcgccgtgaagcaggtgggccgcaacaccttcgtcatgatcgacgccggtttcaacgac
ctgatgcgcccggcgatgtacggggcctaccaccgcatgaccctgctcgacgccgacggc
cagccggttgaccgcccacggcagccgaccgtggtggccgggccgctgtgcgagtcgggt
gatgtgtttacccaggatgaccaggaactgaccccgcacgacctgccccaggcgcaggtg
ggtgacctgctggtgatccacgacgccggggcctacggcgcgtcgatgtcgtcgaactac
aacagccggccgttgctgccggagttcctgatcgaggatggggcgctacggatgattcgc
cgcaggcagacagtgcaggacctgctgggcctggaggcgggcttctag
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