KEGG   Pseudomonas putida S16: PPS_1641
Entry
PPS_1641          CDS       T01570                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppt  Pseudomonas putida S16
Pathway
ppt00300  Lysine biosynthesis
ppt00470  D-Amino acid metabolism
ppt01100  Metabolic pathways
ppt01110  Biosynthesis of secondary metabolites
ppt01120  Microbial metabolism in diverse environments
ppt01230  Biosynthesis of amino acids
Module
ppt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PPS_1641
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PPS_1641
Enzymes [BR:ppt01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PPS_1641
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AEJ12214
LinkDB
Position
complement(1832251..1833498)
AA seq 415 aa
MSSAAMTAPFTLLAEAVRQHGSPLWAYDAGTIAERVEQLKVFDTVRFAQKANPNLHVLRL
MRAHGLVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSI
DMLRQLGERSPGHRVWVRINPGFGHGHSRKTNTGGENSKHGIWHEELGEALACVKAHGLH
LVGVHMHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSSDTPVDLQRY
ARTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFND
LMRPAMYGAYHRMTLLDADGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPHDLPQAQV
GDLLVIHDAGAYGASMSSNYNSRPLLPEFLIEDGALRMIRRRQTVQDLLGLEAGF
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgagtagcgccgccatgactgcacccttcactcttctggccgaggctgtccgccagcac
ggctcgccgctgtgggcctatgacgccggcaccatcgccgagcgtgtcgaacagctgaag
gtgttcgacaccgtgcgcttcgcccagaaggccaaccccaacctgcatgtgctgcgcctg
atgcgcgcccacggcctggtgctggacgcagtgtcgctgggcgaaatggagcgggccttt
gccgcgggcgccagcgtggatggcgaccctgccggcgtggtgctgacctgcgacgcactg
gaccggccgaccctggagcgggtggtggcctcgaagatcgaagtcaacgccggctccatc
gacatgctgcgccaactgggtgaacgctcgcccggccaccgcgtgtgggtccgcatcaac
cccggcttcggccatggccacagccgcaagaccaacaccggcggcgagaacagcaagcac
ggcatctggcacgaagagctgggcgaagcgctggcctgcgtgaaagcccatggcctgcac
ctggtaggggtgcacatgcacatcggctcgggggtggattaccagcacctggagcaagtg
gcccgctcgatgatcgagctgatcggccgcctgggcgtggacatcgaggcgttctccatt
ggcggcgggctttccaccccgtaccgcagcagcgacacgccggtcgacctgcaacgctac
gcccggacctgggccgtggcccgcaaggaaatcgaagcgatgctgggccaccccgtgcgc
atggagatcgagccggggcgcttcctggtggcggaatcgggctacctggtggccgaggta
cgcgccgtgaagcaggtgggccgcaacaccttcgtcatgatcgacgccggtttcaacgac
ctgatgcgcccggcgatgtacggggcctaccaccgcatgaccctgctcgacgccgacggc
cagccggttgaccgcccacggcagccgaccgtggtggccgggccgctgtgcgagtcgggt
gatgtgtttacccaggatgaccaggaactgaccccgcacgacctgccccaggcgcaggtg
ggtgacctgctggtgatccacgacgccggggcctacggcgcgtcgatgtcgtcgaactac
aacagccggccgttgctgccggagttcctgatcgaggatggggcgctacggatgattcgc
cgcaggcagacagtgcaggacctgctgggcctggaggcgggcttctag

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