Pseudomonas putida S16: PPS_2200
Help
Entry
PPS_2200 CDS
T01570
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_2200
Enzymes [BR:
ppt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PPS_2200
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PPS_2200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AEJ12761
LinkDB
All DBs
Position
2473321..2474847
Genome browser
AA seq
508 aa
AA seq
DB search
MRLGLVLGDQLSFDLASLNALDPARDAVLMAEVEGEARYVPHHPLKIVLIFSAMRHFALA
LRERGWQVHYVQLDDDGNSGTIVGELRRWQQALGATHIHLTECGEWRLEQALRDAALPLV
WHRDTRFLCSREAFARWARERGQLRMEHFYRGMRKRTGLLLEPDGSPAGGTWNLDGDNRK
ALPRQLRGPFAAHFAQDDITAAVIALVRQRFSDHYGAIDGFDYPVTHAEARQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRFLCEGVDKAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWLRMPEYAALNYLGNERALPEFYWTGRTRMRCMEQAIGQTLRLGYA
HHIQRLMVTGNFALLAGIAPTAICEWYLAVYMDAFDWVELPNTLGMVMYADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQVAEEGACPFNALYWHFLIRHRHLLSANPRLALVYRNL
DGMSADRRDAIWQRGQSLLARLDAAQPI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggtctggtactgggtgatcagctgtccttcgacctggcaagcctcaacgcc
ctcgatcctgcccgcgatgctgtgctgatggcggaagtggaaggggaggccaggtacgtg
ccgcatcatccgctgaagatcgtcctgatcttcagcgccatgcggcacttcgcactggca
ctgcgcgagcgcggttggcaggtgcattatgtgcaactcgatgatgacggcaacagcgga
accatcgttggcgagttgcggcgctggcagcaggccctgggagccacgcatattcacctg
accgagtgcggagagtggcgcctggagcaggcgttgcgcgatgccgcactgccgcttgtg
tggcatcgcgacacgcggtttctatgctctcgcgaagctttcgcgcgctgggcccgggag
cgcggccaactgcgcatggaacacttctaccgtggcatgcgcaaacgcaccggcctgctg
ctggagcctgacggcagcccggcaggtggaacctggaatctcgatggcgacaaccgcaag
gccttgcctcgccagctacgtggccccttcgccgcacatttcgcacaggacgacatcaca
gctgcagtaatagccctggtacggcaacgcttcagcgaccactacggcgccatcgacggt
ttcgactacccggtgacccatgccgaggcacggcagctctggcaacactttctggatttc
ggcctggcggctttcggtgactaccaggatgcgatggccgagggcgagccgtacctgttc
catgcgcgcatcagtgcagcactcaacatcgggcttctcgatgtgcgttttctatgcgaa
ggggtcgacaaggcctggcgcgaggggcgagtgccgctcaatgcagcagagggcttcatc
cgccagctgatcggctggcgtgagtatgtacgcggcatctattggctgcgcatgccggag
tatgccgcgctcaattacctgggtaacgagcgagcgttgccggaattctactggaccggt
cgcacccgcatgcgctgcatggagcaggccatcgggcaaacccttcgcttgggttacgct
caccatatccagcgcctgatggtcaccggcaacttcgccttgttggccggtatcgcgccc
accgcaatctgtgagtggtacctggctgtctacatggatgccttcgactgggtcgaactg
cccaacacgcttggtatggtgatgtacgccgacggcggctacctgggctccaagccttac
tgcgccagcggtcgctacatccagcgcatgtccgatcattgcaaggcctgcagttacagg
gttgaccaggtggccgaggaaggtgcctgcccgttcaatgccctgtactggcattttctc
atccgtcatcgccacctgctttcggccaacccgcgtctggcgctggtctatcgaaacctc
gatggcatgtcggctgaccgtcgcgatgccatctggcagcgtggccagtcacttttggcg
cgactcgatgcggcgcaaccgatatga
DBGET
integrated database retrieval system
