Pseudomonas putida S16: PPS_2843
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Entry
PPS_2843 CDS
T01570
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPS_2843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppt02044
]
PPS_2843
Secretion system [BR:
ppt02044
]
Type VI secretion system
Imp/Vas secretion system core components
PPS_2843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AEJ13394
LinkDB
All DBs
Position
3162285..3163628
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AA seq
447 aa
AA seq
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MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRTTPFHWGVQVLQVDEDALANGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVHAALKLPEPFGLNYVEDGQE
HKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLARLTRNSMGG
FNLDPHFVHPTLHLGSHETLAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIPEYDHHDPAA
SLVKLDEMIRVMLDNVVPNQCIVINLNQTKPSYWQGQLHDPRLTEADFYISVHADMPGAS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGHVYER
MMNAQTICFYAPSAFTNLKLELMAVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagagccgggtgatgtggtcggaaggcatgttcctgctgccccagcacttc
cagtaccaggatgagttccaccagcaccagctggccgaggcgaccttgcgcaccacccca
ttccattggggtgtgcaggtactgcaggtggatgaggacgccctggccaacggttcgctg
cagctcaagcgcctcaagctggtgttccctgacggcagcctttacgacgcaccgcagcac
gacccgttgccggctgcccgcgacctcaaggacctgctcaaggccaacgacctcaaggtt
catgctgccttgaagctgcccgagccattcggcctgaactatgtcgaggacggccaggaa
cacaaggccgcgcggcgtttccgcaagcagttcgataccctgcccgacctcaatgaaggc
gagctggaaaacgaaatcaccagcctgcgcctgaacgtggtgctgctggtggacggtgac
agcctggacggctacagccactgcccgctggccaggctgacccgcaacagcatgggcggc
ttcaatctcgacccgcatttcgtccaccccactttgcatctgggcagccacgagaccctg
gccggtatcggcaagcgcctgctcggcgccctgcaggccaagagcaaggccctgtccggc
cgacgccgcgaacgcgcagaccagatcgccgagttcggctccagcgacgtaaccctgttc
tggctgctgaacaccgtcaaccgcgcccacccgcagctggcccatctgctggcgcacccg
cgcctgcaccccgagcgcctgtacctgttccttgccgacctggcgggtggcctgctgacg
ttcaccctggacacccagctcagcgacatccccgaatacgaccatcacgacccggccgcg
tcgctggtcaagctcgacgagatgatccgggtgatgctcgacaacgtggtgcccaaccag
tgcatcgtcatcaacctcaaccagaccaagccgtcgtactggcagggccagttgcacgat
ccacgcctgaccgaggccgacttctatatctcggtccatgccgacatgcctggtgccagc
ctgctggagctggtaccgcgggcattcaaggtcggctcgccggaagacatcgaggtggtg
gtcaacagcgcgatgcccggcgtcacgctcaaccatgccgcacggctgcccaacgcaatt
ccggtgcgcctggacaaccagtacttcgccatcgagccgcatggccatgtctacgagcga
atgatgaatgcccagaccatctgcttctacgcgcccagcgcctttaccaacctcaagctt
gaactgatggcggtgctcaaatga
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