KEGG   Pseudomonas putida S16: PPS_3089
Entry
PPS_3089          CDS       T01570                                 
Name
(GenBank) FAD dependent oxidoreductase
  KO
K26064  D-lysine oxidase
Organism
ppt  Pseudomonas putida S16
Pathway
ppt00310  Lysine degradation
ppt01100  Metabolic pathways
ppt01120  Microbial metabolism in diverse environments
Module
ppt_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ppt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    PPS_3089
SSDB
Motif
Pfam: DAO FAD_binding_2 NAD_binding_8 FAD_binding_3 ApbA UDPG_MGDP_dh_N TrkA_N Pyr_redox_2 MurD-like_N Pyr_redox HI0933_like 3HCDH_N AlaDh_PNT_C
Other DBs
NCBI-ProteinID: AEJ13638
LinkDB
Position
3475018..3476262
AA seq 414 aa
MHCQTLVLGAGIVGVSTALHLQARGRQVILIDRDEPGSGTSHGNAGLIERSSVIPYAFPR
QLGALLRYGLNRQPDVRYSLLHLPKAAPWLWRYWRQSAPGRLAGAAADMLPLVQRCVEEH
DAFIAAAGLEGLVQAKGWIEVFRDPALFEQAKADAKGLSRYGLQFEILECGQLQAREHQL
DASVVGGIHWLDPKTVNNPGALTRGYATLFTQRGGQFLHGDARSLRQVDGQWQVDSRRGP
ITANEVVACLGPQSADLFSGLGYQIPLAIKRGYHMHYSTRDGAQLEHSICDTQGGYVLAP
MARGVRLTTGIEFDASSAPGNQIQLGRCEALARKLFPALGERLDDTPWLGRRPCLPDMRP
VIGPAPRHPGLWFNFGHAHHGLTLGPVSGRLVAELVTGERPFTDPAPYSATRFD
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgcattgccagacccttgtcctcggcgccggcatcgtcggcgtcagcaccgcgctgcac
ctgcaggcccgcgggcgccaggtgatcctgatcgaccgcgacgaaccgggcagcggcacc
agccacggcaacgccgggctgatcgagcgctccagcgtgatcccctatgccttcccgcgg
caactgggcgcactgctgcgctacggcttgaaccgccagcccgatgtgcgctacagcctg
ctgcacctgcccaaggccgctccatggctgtggcgctactggcgccaatcggcccccggg
cgcctggccggggccgctgccgatatgctgccgctggtgcaacgctgcgtcgaagagcac
gacgcattcattgctgccgccggcctggaagggctggtgcaggccaaaggctggatcgaa
gtgttccgtgacccggcgctgttcgagcaggccaaggccgacgccaagggcctgagccga
tatggcctgcagttcgaaatcctcgaatgcgggcagttgcaggcccgcgagcaccagctg
gacgccagcgtggtcggcggcattcactggctcgaccccaagaccgtgaacaaccccggc
gccctcacccgcggctacgccaccctgttcacgcagcgcggcgggcagttcctgcatggc
gatgcgcgcagcctgcgccaggtcgacggccaatggcaggtagacagccgccgcggcccg
atcaccgccaacgaggtggtggcctgcctcggcccgcagtcagccgacctgttcagtggc
ctgggctaccagataccgctggcgatcaagcgtggctaccacatgcactacagcacccgt
gacggcgcgcaactggagcattccatctgcgacacccagggcggctacgtgctggcgccg
atggcccgcggtgtgcgcctgaccaccggcatcgagttcgacgccagcagcgcgccgggc
aaccagatccagctgggccgttgcgaagccctggcgcgcaagcttttcccggccctgggt
gagcgcctggacgacaccccctggctgggccgccgcccgtgcctgcccgacatgcgcccg
gtgatcggcccggcaccgcgccacccggggctgtggttcaacttcggccacgcccaccac
ggcctcaccctgggcccggtcagcggccgactggtggccgaactggtcaccggcgaacgc
cccttcaccgaccccgcgccctacagcgcgacccgtttcgactga

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