Pseudomonas putida S16: PPS_3089
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Entry
PPS_3089 CDS
T01570
Name
(GenBank) FAD dependent oxidoreductase
KO
K26064
D-lysine oxidase
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00310
Lysine degradation
ppt01100
Metabolic pathways
ppt01120
Microbial metabolism in diverse environments
Module
ppt_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PPS_3089
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Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
ApbA
UDPG_MGDP_dh_N
TrkA_N
Pyr_redox_2
MurD-like_N
Pyr_redox
HI0933_like
3HCDH_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AEJ13638
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All DBs
Position
3475018..3476262
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AA seq
414 aa
AA seq
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MHCQTLVLGAGIVGVSTALHLQARGRQVILIDRDEPGSGTSHGNAGLIERSSVIPYAFPR
QLGALLRYGLNRQPDVRYSLLHLPKAAPWLWRYWRQSAPGRLAGAAADMLPLVQRCVEEH
DAFIAAAGLEGLVQAKGWIEVFRDPALFEQAKADAKGLSRYGLQFEILECGQLQAREHQL
DASVVGGIHWLDPKTVNNPGALTRGYATLFTQRGGQFLHGDARSLRQVDGQWQVDSRRGP
ITANEVVACLGPQSADLFSGLGYQIPLAIKRGYHMHYSTRDGAQLEHSICDTQGGYVLAP
MARGVRLTTGIEFDASSAPGNQIQLGRCEALARKLFPALGERLDDTPWLGRRPCLPDMRP
VIGPAPRHPGLWFNFGHAHHGLTLGPVSGRLVAELVTGERPFTDPAPYSATRFD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcattgccagacccttgtcctcggcgccggcatcgtcggcgtcagcaccgcgctgcac
ctgcaggcccgcgggcgccaggtgatcctgatcgaccgcgacgaaccgggcagcggcacc
agccacggcaacgccgggctgatcgagcgctccagcgtgatcccctatgccttcccgcgg
caactgggcgcactgctgcgctacggcttgaaccgccagcccgatgtgcgctacagcctg
ctgcacctgcccaaggccgctccatggctgtggcgctactggcgccaatcggcccccggg
cgcctggccggggccgctgccgatatgctgccgctggtgcaacgctgcgtcgaagagcac
gacgcattcattgctgccgccggcctggaagggctggtgcaggccaaaggctggatcgaa
gtgttccgtgacccggcgctgttcgagcaggccaaggccgacgccaagggcctgagccga
tatggcctgcagttcgaaatcctcgaatgcgggcagttgcaggcccgcgagcaccagctg
gacgccagcgtggtcggcggcattcactggctcgaccccaagaccgtgaacaaccccggc
gccctcacccgcggctacgccaccctgttcacgcagcgcggcgggcagttcctgcatggc
gatgcgcgcagcctgcgccaggtcgacggccaatggcaggtagacagccgccgcggcccg
atcaccgccaacgaggtggtggcctgcctcggcccgcagtcagccgacctgttcagtggc
ctgggctaccagataccgctggcgatcaagcgtggctaccacatgcactacagcacccgt
gacggcgcgcaactggagcattccatctgcgacacccagggcggctacgtgctggcgccg
atggcccgcggtgtgcgcctgaccaccggcatcgagttcgacgccagcagcgcgccgggc
aaccagatccagctgggccgttgcgaagccctggcgcgcaagcttttcccggccctgggt
gagcgcctggacgacaccccctggctgggccgccgcccgtgcctgcccgacatgcgcccg
gtgatcggcccggcaccgcgccacccggggctgtggttcaacttcggccacgcccaccac
ggcctcaccctgggcccggtcagcggccgactggtggccgaactggtcaccggcgaacgc
cccttcaccgaccccgcgccctacagcgcgacccgtttcgactga
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