Pseudomonas putida S16: PPS_3385
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Entry
PPS_3385 CDS
T01570
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPS_3385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_3385
Transporters [BR:
ppt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PPS_3385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AEJ13932
LinkDB
All DBs
Position
complement(3796936..3798117)
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AA seq
393 aa
AA seq
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MSGPVTLRVLGTSVTLLESIRLRAEQELGIRVEYQIHDVQTVQRVALMHPESYDLYDQWF
HSMDFVWPAGAIQPIDIRRVALWDEINDLAKRGRLHADDELAGGSLPCDRLYVQHDGSLA
NRPTDSISMLPLTHNADSFAYRPDLLPTGFAIDNESWSWLVDPSWCGHVALQSDAAIGAL
DAALAVQAKGLAQFDCIANLRLDEIDQLADVLIKLQRQGHFVAFWSDDRDAGKLMLGPNV
HIESLWSPALMQLHREGIQYRQAVPKEGYRGWFGGLSLSRAVDGAVKDAAYAYLNWWLAG
WPGAMMARQGFYISNPLRARDHLSAAEWDYWYEGKPAREQLFGSDGEPLIELGETREGGS
YAERVSRISVWNSVMDEHNYLVRKWADFLRAGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccctgtcacgttgagagtactgggtacctctgtcaccttgctggaatccatt
cgcttacgagcggagcaagagctcggcatccgggttgaataccaaatccacgacgtgcaa
acagttcagcgcgttgcgttgatgcaccccgaaagctacgacctttacgatcagtggttc
catagcatggattttgtgtggcctgccggcgctatccagcccatcgatatcagacgagtc
gcgttgtgggatgagatcaatgatctggccaagcggggcagacttcacgctgacgatgag
ctagcgggcggtagtctgccttgcgaccgtttgtatgttcagcatgatggtagcttggcc
aatcgcccaaccgactccatcagcatgctaccgctcacgcacaacgcggacagctttgcc
tatagacccgatcttcttcctacagggtttgccatcgataacgaaagttggtcgtggctt
gttgatccaagctggtgcggccatgtggctttgcagagtgatgccgctattggagcattg
gacgcggcgttggcagtccaggcaaagggcctagcccagttcgactgcattgccaacctc
cgactggatgagatcgaccagcttgctgatgtgctgatcaagcttcaacgccaaggccat
tttgtcgccttctggtctgatgatcgtgatgcaggcaagctcatgcttggccctaacgtt
cacatcgagagtctttggtctccagcgttgatgcaactgcatcgcgaagggattcagtat
cgccaagcagtccctaaagaaggctaccggggctggttcggcggcttgtcgttgtctcgc
gctgttgatggggcagtgaaagatgcggcatacgcctatctgaactggtggctggcaggt
tggccaggcgcgatgatggctcgacaaggcttctacatttccaatccactgcgagctcgc
gatcacctgtcggctgcggagtgggattattggtatgaaggcaagcctgcccgcgaacaa
ttgtttgggagtgatggtgaacccctcatcgagcttggagaaacccgagagggtggctct
tatgccgagcgcgtgagccgtatcagtgtctggaactcagtgatggatgaacataactac
ctggttcgcaaatgggccgattttcttagggcgggcagatga
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