Pseudomonas putida S16: PPS_3438
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Entry
PPS_3438 CDS
T01570
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppt03016
]
PPS_3438
Enzymes [BR:
ppt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PPS_3438
Transfer RNA biogenesis [BR:
ppt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PPS_3438
Prokaryotic type
PPS_3438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NAD_binding_10
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEJ13985
LinkDB
All DBs
Position
3863640..3864599
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AA seq
319 aa
AA seq
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MDLLFLGTSAGVPTKARNVSGTAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLDLVLPAALHDWVRQGLVASDTFLPFELRLLAVE
ELVEWRSDALEVTSVQLSHRVPSVGFVFTELNPEPRLNIPRLEAEGIPRGPLWGELAKGL
TVQHGGRRLHGKDYLRPSRPPRRVIVCGDNDNPELLADVARGADVLVHEATFTQAVVERT
GVTFGHSTAAAVARFAETAGVRNLVLTHFSARYQHDPRRSPSIDNVRDEALAHYSGQLTL
AQDLQRYHIGRDGCLEPAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctgttcctgggcacctccgccggcgtgccgaccaaggcacgcaatgtgagc
ggtaccgcagtgatcgaggccagtggcagccactggtacctggtcgactgtggcgaaggc
acccagcaccggttgctgcacacgccgctgtcgatccgcgacttgcgcgccatcttcatc
acccacgtgcacggcgaccattgcttcggcctaccgggcctgctggccagcgccggcatg
agcgggcgcacccagccgctggaccttgtcctgcccgccgccctgcacgactgggtgcgc
caggggctggtggccagcgataccttcctgccgttcgaactgcgcctgctggccgtggaa
gagctggtggaatggcgcagtgatgccctggaagtgaccagcgtgcagttgtcgcaccgg
gtgccgagcgtcggcttcgtgttcaccgagctcaaccccgaaccgcgactgaacatcccg
cgcctggaagccgaaggtatcccccgcggcccgctgtggggcgagctggccaagggtttg
acggtgcagcatggcgggcggcggctgcacggcaaggattacctgcgcccttcgcgcccg
ccgcggcgggtgatcgtgtgcggcgacaacgacaaccccgagctgttggccgacgtcgcc
aggggcgcggacgtgctggtgcacgaagccacgttcacccaggcggtggtcgagcgcacg
ggggtcaccttcggccacagcaccgcagctgcggtggcgcgctttgccgaaactgcgggc
gtgcgcaatttggtgctgacgcatttcagcgcccgctaccagcacgacccacggcgcagc
ccgagcatcgacaacgtgcgcgacgaagccctcgcccactacagcgggcagctgaccctg
gcgcaggacctgcagcgctatcacatcgggcgcgatggctgtcttgagcccgcgggatga
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