Pseudomonas putida S16: PPS_3659
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Entry
PPS_3659 CDS
T01570
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03030
DNA replication
ppt03430
Mismatch repair
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPS_3659
03430 Mismatch repair
PPS_3659
03440 Homologous recombination
PPS_3659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppt03032
]
PPS_3659
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_3659
Enzymes [BR:
ppt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPS_3659
DNA replication proteins [BR:
ppt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPS_3659
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPS_3659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
ResIII
AAA_30
TIP49
PIF1
AAA_18
AAA_19
AAA_16
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AEJ14202
LinkDB
All DBs
Position
complement(4130418..4132490)
Genome browser
AA seq
690 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPVGISQATADPATPVAAPAVAVAPPAAAVVAPVAPVAEQQVQAPAPVE
PAPQPVVEPVVAAEPAPVSEPEPAPEPVAEVVDLPWEEPAPTPAPVVAEPAPAPAPAAVP
TPAPAAPAHDDEPPFDPSAYAAVGMDRDDEPPLDEDYYGGESDPVGFSYLDELAEHVQEE
APKPAAVPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAVDGDDWLLHLDPGQ
GALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVTSIEQD
PLIQQMIKLFGAKVRQDTIEPVEALVNQGQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctgcaccatgcc
tatctgttcactggtacccggggtgtgggcaagacgaccattgcccgtatcatcgccaag
tgcctgaactgcgaaaccggcatcacctcaacgccctgcggtacctgttcggtgtgccgg
gagattgacgaaggccgtttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggacacgcgcgaactgctcgataacgtgcagtacgccccgagtcgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgactcactcgttcaacgccttgctc
aagacgctggaagagccaccgccctacgtcaagttcatcctcgccaccactgacccgcag
aaactgccggccaccatcctgtcgcgctgtctgcagttctcgctgaagaacatgagcccg
gagcgggtggtcgagcacctcagccatgttctggccgccgagaacgtgccgttcgagccg
gatgccctgtggctgctggggcgcgcggccgatggctcgatgcgcgacgccatgagcctg
accgaccaggccatcgcctttggcgaaggcaaggtactggccgccgatgtgcgggccatg
ctcggcagccttgatcatggccaagtctacggggtgctgcaggcgttgctcgaaggcgat
gcccgggccttgctcgaggccgtgcgcaacctggccgagcagggcccggactgggctggc
gtgctggccgagatgctcaatgtgctgcaccgcgtggccattgcccaggcgctgccggaa
gcggtggacaacggccagggcgaccgtgagcgggtgctggcgctggcctcggcattgcca
gccgaggacgtgcagttctattaccagatgggcctgataggccgccgtgacctgccactt
gcgccggacccgcgcggcggcttcgaaatggtcctgctgcgcatgctcgcgttccgcccc
gccgacaccgacgacgcgccgaagccggtactaaagccagtggggatcagccaggccaca
gctgatcctgcaacaccggtggcagcgccggcggttgccgtggcgccgccggccgctgct
gtcgtggcgccggttgcaccggttgccgagcaacaagtgcaggcgcccgcaccggtcgaa
ccagcgccacagccggttgtcgagcctgtggtggcagctgagcctgccccggtcagtgaa
cctgagccagcaccagaacccgtggcagaggtggttgacctgccatgggaagagcccgcg
ccaacgcccgcaccggtagtggccgagcctgcgccggctcctgcaccggccgctgtgccc
acgccggcacctgccgccccggcacacgacgacgagccacccttcgacccgtccgcctat
gccgccgtgggcatggaccgcgacgatgaaccgccactggacgaagactattacggcggc
gaaagcgacccggtcggcttcagctacctggacgaactggccgaacacgtccaggaagaa
gcacccaagccggcagccgtaccgctgcccgcagccaagccggctaccggcctggccctg
caatggctggaattattcccacagttgcctgtatccgggatgacaggcaacatcgcggca
aactgtacgttgattgccgtcgatggcgacgactggctgctgcacctggaccctggccag
ggtgcgctgttcaacgcgacccagcaacggcgccttaacgaagcgctcaaccagcacctg
gggcgcacgctgaacctgcgcatcgagctgatcctgcccgagcaggaaaccccggcccag
gcagcggcgcgcaaacgcgccgagcgccagcaggacgcggtcacctcgatcgagcaggat
ccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcaggatactattgag
cctgtagaagccctggttaatcagggccagtaa
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