Pseudomonas putida S16: PPS_3838
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Entry
PPS_3838 CDS
T01570
Name
(GenBank) FAD linked oxidase domain-containing protein
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00310
Lysine degradation
ppt01100
Metabolic pathways
ppt01120
Microbial metabolism in diverse environments
Module
ppt_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PPS_3838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
CCG
Fer4_20
Motif
Other DBs
NCBI-ProteinID:
AEJ14379
LinkDB
All DBs
Position
complement(4329204..4332224)
Genome browser
AA seq
1006 aa
AA seq
DB search
MIAQLPTVAPSANYPEFLEALRNSGFRGQISADYGTRTVLATDNSIYQRLPQAAVFPLDA
DDVARVATLMAEGRFQQVKLTPRGGGTGTNGQSLTDGIVVDLSRHMNKILEINVEERWVR
VQAGTVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELH
SVLLGGERLHSLPIDDAALEQACAAPGRVGEVYRMAREIQETQADLIEATFPKLNRCLTG
YDLAHLRDEQGRFNLNSVLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDA
NALMAHKPLSIETVDSKVLMLAMKDIVWHSVAEYFPADPERPTLGINLVEFCGDEPAEVN
AKVQAFIQHLQNDTSVERLGHTLAEGAEAVTRVYTMRKRSVGLLGNVEGEVRPQPFVEDT
AVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAV
AALTKSYGGLLWGEHGKGLRSEYVPEYFGELYPALQRLKGAFDPHNQLNPGKICTPLGSA
EGLTPVDGVTLRGDLDRTIDERVWQDFPSAVHCNGNGACYNYDPNDAMCPSWKATRERQH
SPKGRASLMREWLRLQGEADIDVLAAARNKVSWLKGLPARLRNNRARSQGQQDFSHEVYD
AMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPG
LYNAVMGSKWVSKLLADKVGMVDSPLISRFNFQATLTRCRVGVASVPALRELTPAQRERS
IVLVQDAFTRYFETPLLSAFIDLAHRLGHRVFLAPYSANGKPLHVQGFLGAFAKAAIRNA
TQLKALADCGVPLVGLDPAMTLVYRQEYQKVPGLDGCPQVLLPQEWLMDVLPEQAPTAPG
TFRLMAHCTEKTNVPASTKQWEQVFARLGLKLVTEATGCCGMSGTYGHEARNQDTSRTIF
EQSWATKLDKEGEPLATGYSCRSQVKRMTERQMRHPLEVVLQYAKR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccagctgccgaccgttgccccgagcgccaactaccccgaattcctcgaagcc
ctgcgcaacagcggcttccgtggccagatcagtgccgactacggcacccgcacggtgctg
gccaccgacaactcgatctaccagcgcttgccacaggcggcggtgttcccgctggacgcc
gatgatgtggcgcgggtcgccacgctgatggccgaggggcgcttccagcaggtcaagctg
accccgcgcggtggtggtaccggcaccaacgggcagtcgctgaccgacggtatcgtcgtc
gacctgtcgcggcacatgaacaaaatcctcgaaatcaacgtcgaggaacgctgggtgcgg
gtgcaggccggtactgtcaaggaccagctcaacgctgcgctcaagccgcacgggctgttc
ttcgcccccgagctgtccacctccaaccgtgccactgtcggcggcatgatcaacaccgac
gccagcggccagggcagctgcacctatggcaagacccgcgaccacgtactggagctgcac
agcgtgctgctcggcggcgagcgcctgcacagcctgccgatcgacgatgccgcgctggag
caggcctgtgctgcgcccggccgggtcggcgaggtgtaccgcatggcgagggagatccag
gaaacccaggccgatctcatcgaagccaccttccccaagctcaaccgttgcctgaccggt
tatgatctggcccacctgcgcgacgagcagggccgcttcaacctcaacagcgtgctgtgc
ggtgccgagggctcgctgggctatgtggtcgaagccaagctcaatgtgctgccgatcccc
aagtacgccgtgctggtcaacgtgcgctacaccagcttcatggatgccctgcgtgacgcc
aacgcgttgatggcgcacaagccgctgtcgatcgagactgtcgactccaaggtgctgatg
ctggcgatgaaggatatcgtctggcacagcgtcgccgaatacttcccggccgaccccgag
cgcccgaccctgggcatcaacctggtggagttctgcggcgacgagccggccgaggtcaat
gccaaggtgcaagcgttcatccagcacctgcagaacgacaccagcgtcgagcgcctgggc
cacaccctggccgagggcgccgaggcggtgacccgcgtctataccatgcgtaaacgttcg
gtgggcctgctgggcaacgtcgagggcgaagtacgcccgcaaccgttcgtggaagacacc
gcggtaccgccggagcaactggccgactacatcgccgacttccgtgcactgctcgatggc
tacggcctggcctatgggatgttcggccacgtcgatgccggcgtgctgcacgtgcgcccg
gcgctggacatgaaggacccggcccaggccgcactggtcaagccgatttccgacgccgtg
gcggcgctgaccaaaagctatggcggcttgctgtggggcgagcacggcaagggcctgcgt
tctgaatacgtgccggagtacttcggcgagctgtacccggcgctgcagcgccttaaaggc
gccttcgacccacacaaccagctcaacccgggcaagatctgcaccccgttgggcagtgcc
gaaggcctgaccccggtcgatggcgtaaccctgcgcggcgatctcgaccgcaccatcgac
gaacgcgtgtggcaggacttccccagcgccgtgcactgcaacggcaacggcgcctgctac
aactacgaccccaacgacgccatgtgcccgtcgtggaaggccacccgcgagcgccagcac
tcgcccaagggccgtgcctcgctgatgcgcgaatggctgcgcctgcagggcgaagccgat
atcgacgtgctggcggcggcacgcaacaaggtgtcgtggctcaagggcctgccggcacgc
ctgcgcaacaaccgtgcgcgcagccagggccagcaagacttctcccatgaggtgtacgac
gccatggccggctgcctggcgtgcaagtcgtgcgccgggcagtgcccgatcaaggtcaac
gtgccggacttccgctcgcgcttcctcgagctgtaccacggccgctaccagcgcccgctg
cgtgactacctgatcggttcgctggagttcaccatcccgtacctggcccacgcgcccggg
ctgtacaacgcggtgatgggctcgaagtgggtgagcaagctgctggccgacaaggtcggc
atggtcgacagcccgctgatcagtcgcttcaacttccaggccaccctgacccgctgccgc
gtcggcgtggccagcgtgccggccctgcgtgaactgaccccggcccagcgcgagcgcagc
atcgtgctggtgcaggatgcctttacccgttacttcgagacaccgctgctgtcggccttc
atcgacctggcgcaccgcctgggccaccgggtgttcctggcgccgtatagtgccaatggc
aagccactgcacgttcagggcttcctcggtgcgttcgccaaggcggcgatccgcaatgcc
acccagctcaaggccctggctgactgcggcgtgccgctggtgggcctggacccggcgatg
accctggtgtatcgccaggagtaccagaaagtgccgggcctggatggctgcccgcaggtg
ctgttgccacaggagtggttgatggacgtgctgccggagcaggcaccgaccgcgccgggc
actttccgcctgatggcgcactgcaccgagaagaccaacgtgccggccagcaccaagcag
tgggagcaggtgtttgcccgccttggcctgaagctggtgaccgaggcgactggctgctgc
ggtatgtccggtacctatgggcacgaggcgcgcaaccaggacacctcacggaccatcttc
gagcagtcgtgggcgaccaagctggacaaggaaggcgagccgctggcgaccggttactcg
tgccgcagccaggtcaagcgcatgaccgagcggcagatgcgccacccgctggaagtggtg
ctgcagtacgccaagcgctga
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