Pseudomonas putida S16: PPS_3888
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Entry
PPS_3888 CDS
T01570
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPS_3888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_3888
Transporters [BR:
ppt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPS_3888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
RsgA_GTPase
AAA_29
MMR_HSR1
AAA
MeaB
AAA_21
AAA_30
P-loop_TraG
AAA_18
AAA_5
AAA_28
AAA_33
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEJ14429
LinkDB
All DBs
Position
4382034..4383866
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AA seq
610 aa
AA seq
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MLYRRFEQLIDIFRDAPSESPPGQVWPFYLYYLRQVWPSFLALLVVGLFASLIEVAMFSY
LSRIIDLAQGTPNASFFSEHSGELIWMLVVILLLRPIFFGLHDLLVHQTINPGMTSLIRW
QNHTYVLKQSLNFFQSDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAITSLVLFAE
ADWRLMLPLLLWIAGYIAALFYFVPRVKERSVISSDARSKLMGRIVDGYTNIATLKLFAH
TDFEQQYAREAIREQTEKTQLAARVVTSMDVVITTLNGLLVVATTGLALWLWSQSLITVG
AIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDRPNAPALKVSRG
AVRFDDVDFHYGKAANVIEGLSLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRIL
IDGQDIAEVSQASLRAQIGMITQDTSLLHRSIRDNLLYGRPDASEAALHEAVRRARADEF
IPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEA
AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWH
HQTGGFVGVD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgtaccgccgtttcgagcaactgatcgacatcttccgcgacgcgcccagcgagtcg
ccacctggccaggtgtggccgttctacctgtactacctgcgccaggtgtggccgagcttt
ctcgccctgctggtggtgggcctgttcgcctcgctgatcgaggtggcgatgttcagctac
ctcagccgcatcatcgacctggcacagggcacgcccaatgccagtttcttcagcgaacac
agcggcgaactgatctggatgctggtggtgatcctgctgttgcgcccgatattcttcggc
ctgcacgacctgctggtgcaccagaccatcaaccccggcatgaccagcctgatccgctgg
caaaaccacacctatgtactcaagcagagcctgaacttcttccagagcgacttcgccggg
cgcatcgcccagcgcatcatgcagaccggcaactcactgcgagactctgcggtgcaggcg
gtggatgcgctatggcacgtgctgatctacgccattacctcgctggtgctgttcgccgag
gccgactggcgcctgatgctgccgctgctgctatggatcgcaggctacatcgccgcgctg
ttctacttcgtcccccgggtgaaggagcgttcggtgatttcctccgacgcccgctccaag
ctgatgggccgcatagtcgacggctacaccaacatcgccaccctcaagctgttcgcccac
accgacttcgaacagcagtacgcgcgcgaagcgatccgcgaacagacagagaaaacccag
ctggccgcacgcgtggtcaccagcatggacgtggtcatcaccaccctcaatggcttgctg
gtggtcgccaccacaggcctggcgctgtggctgtggagccagtcgctgatcaccgtcggc
gccatcgccctggccaccggcctggtgatccgcatcgtcaacatgtcgggctggatcatg
tgggtggtcaacggcatcttcgagaacatcggcatggtccaggacggcctgcagaccatc
gcccagccggtcaccgtcaccgaccggcccaacgcaccggcgctcaaggtcagccgcggt
gcggtgcgtttcgatgatgtggacttccattacggcaaggccgccaacgtgatcgaaggg
ctcagcctggacatacgcccgggcgagaagatcggcctgatcggcccctcgggggcaggc
aagtcgaccctggtcaacctgctgctgcggctgtatgacgtgcagggcgggcgcattctc
atcgacggccaggacattgccgaggtaagccaggccagcctgcgcgcgcagatcggcatg
atcacccaggacacctcgctgctgcaccgctcgatccgtgacaacctgctgtatggccgc
cccgatgccagcgaggccgcgcttcatgaagcggtgcgccgggcccgcgccgacgagttc
atcccgcagctgtcggacgctcaggggcgcaccggtttcgatgcccatgtgggcgagcgc
ggggtcaagctgtcgggtggccagcgccagcgcatcgccattgcccgggtgctgctgaag
aatgcaccgatcctgatcatggacgaggccacttcggcgctggactcggaggtagaggca
gcaatccaggaaagcctggagacgctgatgcagggcaagacggtgatcgccattgcccac
cggctttccaccatcgcccggatggaccggctggtagtgctggacaaggggcggattgtc
gagagtggcagccacagtgaactgctggagcagcaaggcttgtatgcccggttgtggcat
caccagaccggggggtttgtcggggtcgactga
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