Pseudomonas putida S16: PPS_3916
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Entry
PPS_3916 CDS
T01570
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_3916
Transporters [BR:
ppt02000
]
Other transporters
Pores ion channels [TC:
1
]
PPS_3916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
PRR18
DUF6378
Motif
Other DBs
NCBI-ProteinID:
AEJ14457
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All DBs
Position
4414902..4417361
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AA seq
819 aa
AA seq
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MSKSLPGSLNPLAKALLIRHSLRPQRAFTRIGLGLAISAAMVAQVQAQEWTLDIPAQSMN
SALQALARQTDTQLLYSPEDIGGLRSSALKGRHDLASSLRILLGGSGLRYQIDGNTVTVT
AGSAAKDGQVELSATNVNSVGLGATTEGTGSYTTGVTSTATRMNLSIRETPQSISVITRQ
QMDDQHLATITDVLKQNPGITMSQDGGERFHIYSRGSEISTYQLDGVNTTQDYLTRNMPN
TLMDMAMFDRIEIVRGATGLMTGAGEPNGVVNMVRKRPTREFQSYVQAGVGSWDYYRTEA
DVSGPLIESGKLRGRLVAAKQSNQSYMDWYSQDRDLVYGVLEADLTDTTTVRFGMDYQTY
DANGAPGVPLFFSNGQPTNFSRSTSSGPRWMYEDYTTKNYSFGLDQELGNGWQLKMAGNY
MDVDRDSLSAFYRTGAGVSTLDQATGNAKSDLLQVDAHQVQRGMNITLQGPFELFGQTHE
LVTGFDYMDYENNHFTGRAGEATFNFYTWGNRIPQPGNYSPLLDYDLTIRQTGYFIATRL
NFTDDLHMILGARTTNYRSDSNQVVLTTGTGNPTQLKEHGEVTPYAGLIYDLTDEQSVYA
SYTDIFKPQTSRDRTGKVLDPVIGQNYEMGWKGEFYDGRLNANAAIYLIKRDNLAEEDTG
FSVPGVPNSTAYRAVSGAETKGIDLELSGEVARGLEVHTGYSHSRTEDANGARLTSQLPL
DTFRLWTTYRLPGEWEHLTVGGGVNWNSQQSLATRYNTRITQEDYAVASLMARYKISEHL
AATLNVDNLFDKKYYAGLAGNYGHYGAPRNATLNLRYDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtccctccccggctcgctcaacccgcttgccaaagcactactgatccgtcat
tcccttcgtccccagcgcgcgttcacacgcatcggcctgggcctggcgatatccgctgcg
atggttgcccaggtgcaggcgcaggagtggacactggatattcccgcgcagtcgatgaac
tcggcgttgcaggcactggccaggcagaccgatacccagttgctgtacagcccggaagat
atcggtggcctgcgctcctccgcactcaaagggcgccacgatctcgcttcgtccctgcgc
atcctgctgggcggcagcgggctgcgttatcaaatcgacggcaacaccgtgacggtaaca
gcgggttcagccgcaaaggacggccaggtcgagctttcggcgaccaacgtcaatagcgtg
ggcctgggggccactaccgaaggcacgggttcctacaccaccggcgtgaccagcacggcc
acccgcatgaacctgtcgatacgcgaaacaccgcaaagcatcagcgtcatcacccgccag
caaatggacgaccagcacctggcgaccattactgacgtactgaagcagaacccgggcatc
accatgtcccaggacggtggcgagcgctttcacatctattcgcgcggctcggaaatcagt
acctaccagctcgatggcgtgaacaccacgcaagactacctgacgcgcaacatgcccaac
accctgatggacatggccatgttcgaccgcatcgagatcgtccgcggtgccactggcctg
atgaccggtgcgggcgagcccaacggtgtggtcaacatggtacgcaagcgccccacgcga
gaattccagtcgtatgtgcaggccggtgtgggctcgtgggactactatcgcaccgaggcc
gacgtgtccggcccactgatcgaaagcggcaagctgcgcggccgcctggtggccgccaag
cagagcaaccagagctacatggactggtacagccaggaccgtgacctggtctacggcgtg
ctcgaagcagacctgaccgataccaccaccgtgcgcttcggcatggactaccagacctac
gacgccaatggcgcgccaggtgtgccgctgttcttcagcaatggccagcccaccaacttc
tcccgctcgaccagttccgggccgcgctggatgtatgaagactacaccaccaagaactac
tccttcggcctggatcaggagcttggcaatggttggcagttgaaaatggccggcaactac
atggatgtcgatcgcgactcgctgtcggcgttctatcgcaccggtgccggggtctctacc
ctcgatcaagccaccggcaacgccaagtccgacctgctgcaagtcgatgcccaccaggtt
cagcggggcatgaacatcacgctgcaggggcctttcgagctgtttggccagacccacgaa
ctggttaccggcttcgactacatggattacgagaacaaccacttcaccggcagagctggg
gaagccacattcaacttctacacctggggcaaccgcataccgcaacctggcaactattcg
ccactgctggactacgacctgaccatccgccagaccggttacttcattgccacccggctc
aacttcaccgacgacctgcacatgattctcggtgcccgtacaaccaactaccgttcggac
tcgaaccaggtggtattgaccactggcactggcaaccccacgcaacttaaggagcacgga
gaggtaacaccgtacgccggcctgatctatgacctgaccgatgagcaatcggtgtacgcc
agctacaccgatatcttcaagccccagaccagccgcgaccgtaccggcaaggtgctggac
cctgtgatcgggcagaactatgaaatgggctggaaaggtgagttctacgatggtcgcctg
aacgccaacgcggcgatctacctcatcaagcgcgacaaccttgcagaggaagacaccggt
ttcagcgtaccgggcgtgcctaactccaccgcttaccgcgcggtcagcggcgccgaaacc
aagggcattgatcttgaactgtccggcgaagtggctcgcgggcttgaggttcataccggt
tacagccactcccgcacggaagatgccaatggcgctcggctgacgtctcaactgccgctg
gatacattccgcctgtggactacctaccgcctgcccggcgaatgggagcacctgactgtt
ggtggtggggtcaactggaactcccagcaatccctggccacccgctacaacacgcgcatc
acccaggaagactacgccgtggccagcctgatggcccgctacaagatcagcgagcacctg
gccgccacgctgaacgtggacaacctgttcgacaagaagtactacgcaggcctggccggc
aactatggccactatggcgcgccgaggaacgcgacgctgaacctgcgctacgatttctga
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