Pseudomonas putida S16: PPS_3955
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Entry
PPS_3955 CDS
T01570
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00260
Glycine, serine and threonine metabolism
ppt00270
Cysteine and methionine metabolism
ppt00450
Selenocompound metabolism
ppt00670
One carbon pool by folate
ppt01100
Metabolic pathways
ppt01110
Biosynthesis of secondary metabolites
ppt01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPS_3955
00270 Cysteine and methionine metabolism
PPS_3955
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PPS_3955
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PPS_3955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppt04147
]
PPS_3955
Enzymes [BR:
ppt01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
PPS_3955
Exosome [BR:
ppt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PPS_3955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AEJ14496
LinkDB
All DBs
Position
complement(4470117..4471298)
Genome browser
AA seq
393 aa
AA seq
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MGLTMSDKPRNFATRTIHAGEQFSVADNAIFPAIVTASSFTKRSLDDKPEYSYSRVGNPT
RHAYETCVAALEEGVGAVACASGVNATATVLELLPKDAHVVVMNGVYGGTFRIMEDYRSR
TSGLTTTYVDLNDLEAVAAAIKPETQLIWIESPTNPLLHLVDIKAVCDLAKARGILTCID
NTFCSPWNQRPITLGVDLVMHSASKYIGGHSDLTGGVVVAANDALLARLRRISMAIGAVQ
GPFDCYLALRGLKTLDVRMERQCANALQVARFLESHAQIEQVYYPGLESHPQHELCKRQM
RSGGAVVAMKVKGDRVALNRLVEALQIFVLADSLGGVESMINHSWSMSHCSLSPEQKGVM
GISENLLRLSVGIEDYRDLVEDLDGALKAAAAM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaccatgtccgacaagccgcgcaatttcgccacccgtaccattcacgccggt
gagcagttcagcgtcgccgataacgctattttcccggcgatcgtcaccgccagctcgttc
accaagcgcagcctggacgacaaaccggaatactcctacagccgcgtcggcaaccccacc
cggcatgcctatgaaacctgtgtcgccgccctggaagagggcgttggcgcggtcgcctgc
gcctcgggcgtgaacgccaccgccaccgtgctggagctgctgcccaaggatgcccatgtg
gtggtgatgaacggcgtgtacggcggtaccttccgcatcatggaagactaccgcagccgc
acctcgggcctgaccaccacctacgtcgacctcaacgacctcgaggcggtggccgccgcc
atcaagccggaaacccagctgatctggatcgaatcgccgaccaacccgttgctgcacctg
gtcgacatcaaggcggtgtgcgacctggccaaggcacggggcatcctcacttgcatcgac
aacaccttctgctcgccgtggaatcagcgcccgatcaccctgggcgtggacctggtgatg
cactcggccagcaagtacatcggcggccactccgacctcaccggtggcgtggtcgtagct
gccaatgatgcgctgttggcgcgcctgcgccgcatcagcatggcgattggcgcggtgcag
gggccgttcgactgctacctggccctgcgcggtctgaagaccctggatgtgcgcatggag
cgccagtgtgccaatgccctgcaggtggcacgcttcctcgaaagccacgcgcagatcgag
caggtgtattacccggggctggaaagccacccgcaacatgagttgtgcaaacggcagatg
cgcagtggcggggcggtagtggcgatgaaggtcaagggcgaccgggtcgcgctaaaccgc
ctggtggaggcgctgcagatcttcgtgctggccgactcgctgggcggggtggaaagcatg
atcaaccactcctggagcatgtcgcactgctcgctgagcccggagcagaagggcgtgatg
ggcatcagcgaaaacctgctgcggttgtcggtggggatcgaggattaccgggacctggtc
gaggacctggatggggcattgaaggctgcggctgctatgtga
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