Pseudomonas putida S16: PPS_4001
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Entry
PPS_4001 CDS
T01570
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPS_4001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_4001
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PPS_4001
RecFOR pathway proteins
PPS_4001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AEJ14542
LinkDB
All DBs
Position
complement(4520448..4521053)
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AA seq
201 aa
AA seq
DB search
MRGTLAEKQPPHLIIDVNGVGYELEVPMTTLYRLPKVGEPVTVHTHLVVREDAHLLYGFA
EKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALVRVPGVGKKTAERL
LVELKDRFKAWETSPAMFTLVSDGPLPVASASTAEADAVSALVSLGYKPQEASKAIAAIK
DKAGLSSEELIRRSLKGMITK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcggcaccctggcggaaaaacagccgccgcacctgattatcgacgtcaacggcgta
ggttacgaactggaagttcccatgaccacgctgtaccgtctgcccaaggtgggcgaaccc
gtaaccgtgcacacccacctggtggtgcgcgaggatgctcacctgctctacggttttgcc
gaaaagcgtgagcgcgagctgttccgcgaactcatccgtttgaatggggtagggccgaag
ctggccctggcgctgatgtccgggctggaagtggacgagctggtgcgctgcgtgcaggct
caggacacctcggccctggtgcgcgtgcccggtgttggcaagaaaaccgccgaacgcctg
ctggtcgagctcaaggaccgtttcaaggcttgggaaacgtccccggccatgttcaccctg
gtctccgacgggccgctgccggtcgccagcgcatccacggccgaagccgatgccgtcagc
gccctggtttccctgggctacaagccgcaggaagccagcaaggcgattgccgcgatcaag
gacaaggccggcctgagcagtgaggagctgatccgccgcagcctgaaagggatgattacc
aagtga
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