Pseudomonas putida S16: PPS_4118
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Entry
PPS_4118 CDS
T01570
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppt03021
]
PPS_4118
Transcription machinery [BR:
ppt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PPS_4118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEJ14657
LinkDB
All DBs
Position
4664815..4667751
Genome browser
AA seq
978 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGEVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLEGGESKAWEALVADARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAQRIGSGEAKVMPAHVERVAEAQRRLKAEADEEL
ARLVALQAVNPSVRDSEIEALRKQREEGLGDAGKGRPAPGSHSRAGGWLIQARHRRLCGS
GLVSRKGRNAAPELTRYS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacccgccagtattccctgcgcaatgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgaaggctggaagttgaccgtgcgcgaggtcgaggacatcgac
gggctgatggtctaccacggcctggacgggcagaaccagccgcgcaccctgccagaaacc
cagttgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctctcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
cagtcggcgctgtggggcctgggcggctgccgtgcccaacccatcgcccaccagttgcac
atcgcccgcgaagtcgccgaccgcagcgcgccacgcgtcttgttggccgacgaagtaggc
ctgggcaaaaccatcgaagccggcctggtgatccatcgccagctgctgtctggccgcgcc
agccgcgttctgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtggccctgttcgacgccgagcgtttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggtggcactggagtggctggtagaagac
gaaaaggcccaggacgcgctgttcgccgctggctgggacctgatggtggtggacgaagcc
caccacctggtctggcacgaagaccaggtcagcgccgaatacggcctggtcgaacagctg
gcccaagtgatcccgggcgtgctgctgctcacggccacccccgagcagctcggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgtttccacgacctggccgccttc
cgcgccgagagcgagcactatcgcccggtggctgaagccgtacaggaactgctcgacgaa
ggccgcctgtcgcccaaggcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gccctgctggccgcggtcagcgacggcgatacccaggccagcgcgcgcctgatccgtgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgtaacacccgcgcggcgatccag
ggcttccctgagcgccagctgcacccttacccactggcgacgcccgagcagtaccgcgac
ctgccagccggcgaacatgccgagctgtacccggaagtcgccttccaggcccagggcgag
gtggccgatgacgagcgctggtggcgtttcgacccgcgcgtcgactggctgatcgacacc
ctgaagatgctaaagcgtaccaaggtgctggtgatctgcgcccatgccgaaaccgcgatg
gacctggaggacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgagggc
atgagcatcctagaacgtgaccgcgccgccgcctacttcgctgacgaagagttcggcgcg
caggtgctgatctgctccgagatcggcagtgaaggccgcaacttccagtttgcccaccat
ctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgcctc
gaccgtatcggccagaagcacaccatccagctgcatatcccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgccct
accggcaacgccctgcagcaccagttcggcccgcgcctgctgccactgcttgaaggtggc
gaaagcaaggcctgggaagccctggtggccgacgcccgcagcgaacgcgaacgcctggaa
gccgaactgcataccggccgtgaccgtctgctggagctcaactccggcggtgccggcgaa
ggccaggcgctggtcgaggacattctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgccctg
atcctcaagccgagcgaaaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacctacgaccgtggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggaacacccgatggtacaaggcggcatggatctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaaacccgggaccgtgctgcttgaactg
ctgttcgtcagcgaggtggtggcaccgcgcagcctgcaactggggcgttacctgccaccg
gcggcattgcgctgcctgctcgatgccaacggcaacgacctggcgtcccgcgtggccttc
gaaaccctcaacgaccagctggaaagcgtgccacgcgccagcgccaacaagttcgtccag
gcccagcgtgacgtgctggcccagcgcatcggcagcggcgaggccaaggtcatgccggcc
cacgtcgagcgcgtggccgaggcccagcgccgccttaaagcggaggccgacgaagaactg
gcccgtctggtcgccctgcaagcggtcaacccgagcgtgcgcgacagcgagatcgaagcg
ctgcgcaagcagcgcgaagagggcctgggcgatgctggaaaaggccgccctgcgcctgga
agccattcgcgtgctggtggctggctaatacaggccagacaccgccgcctttgtgggagc
ggccttgtgtcgcgaaagggccgcaacgcggccccagaattgacgcgctacagttga
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