Pseudomonas putida S16: PPS_4213
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Entry
PPS_4213 CDS
T01570
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPS_4213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_4213
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPS_4213
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PPS_4213
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEJ14752
LinkDB
All DBs
Position
complement(4777387..4778070)
Genome browser
AA seq
227 aa
AA seq
DB search
MEQPVGQPAYVLHSRAYKETSALVDFFTPQGRMRAVLRRARGKGGSLVRPFVPLELELRG
RGELKNVGRMDSAGIAAWLHGDALFSGLYLNELLMRLLPAEAPFPALFEHYTLTLQALAA
GRPLEPLLRSFEWRLLDELGYAFSLHHDVNDQPIAGEGLYRLRVDAGLERVELVQPGLFR
GTELLALAEADWDAPGALLAAKRLMRQALAVHLGAKPLVSRELFRKR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacctgtcggccagccagcctacgtgctgcacagccgtgcctacaaggaaacc
agcgcgctggtggacttcttcaccccgcagggccgcatgcgtgccgtgctgcgccgtgcg
cgtggcaagggtggcagcctggtgcggccgttcgtgccgctggaactggagctgcgcggg
cgtggcgagctgaagaatgtcgggcgcatggacagcgctggcatcgccgcctggctgcat
ggcgatgccctgttcagcgggttgtacctcaacgaactgctcatgcgcctgctgcccgcc
gaagcgcctttcccggcgctgttcgagcactacaccctgaccttgcaggccttggccgcc
ggtcgcccgctggagccgctgctgcgctcctttgaatggcggctgctggacgaactcggt
tatgcgttttcgttgcaccacgacgtcaatgaccagccgatcgcgggtgaaggcctgtac
cgcttgcgtgtggatgccggcctggagcgggtcgagctggtgcaacccgggctgttccgc
ggcaccgaactgctggccctggccgaagccgactgggatgccccaggtgccttgctcgcc
gccaagcgcctgatgcgccaggcactggcggttcacctgggggcaaaaccactggtcagc
cgcgaactgtttcgcaagcgctga
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