Pseudomonas putida S16: PPS_4215
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Entry
PPS_4215 CDS
T01570
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PPS_4215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppt03019
]
PPS_4215
03009 Ribosome biogenesis [BR:
ppt03009
]
PPS_4215
03036 Chromosome and associated proteins [BR:
ppt03036
]
PPS_4215
Enzymes [BR:
ppt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PPS_4215
Messenger RNA biogenesis [BR:
ppt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PPS_4215
Ribosome biogenesis [BR:
ppt03009
]
Eukaryotic type
90S particles
RNase
PPS_4215
Prokaryotic type
rRNA processing factors
PPS_4215
Chromosome and associated proteins [BR:
ppt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PPS_4215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AEJ14754
LinkDB
All DBs
Position
complement(4779090..4779779)
Genome browser
AA seq
229 aa
AA seq
DB search
MSAPLARLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGDHLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMETARERVLAWLADEFEGLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccccttgcccgtctggagcgaaagctcggttataccttcaagaaccaggac
cagatgctcctggcactgacccatcgcagctacgccgggcgcaacaatgagcgcctggag
tttctcggtgacgccattctcaacttcgtcgccggcgaagcgctgttcgagcgcttcccg
caggcccgcgaaggccagctgtcgcgcctgcgcgcgcggctggtcaagggtgagaccctg
gcccgcctggcccgtggtttcgacctgggcgatcacctgcgcctgggctcgggtgagctc
aagagcggtggtttccgccgcgagtcgatcctggccgacgccctggaggcgctgattggc
gccatctacctggacgccgacatggaaacggcccgggagcgcgtgctggcctggctggcc
gatgaattcgaaggcctgaccctggtcgataccaacaaggacccgaaaacccgcctgcag
gagttcctgcagtcgcgcagctgtgagctgccgcgttacgaagtggtggatatccagggc
gaaccgcattgccggaccttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggccagggcgttagccggcgtatcgccgagcaagtcgccgccgcgtctgcactgatc
gccctgggcgtggagaatggcaatgactga
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