Pseudomonas putida S16: PPS_4236
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Entry
PPS_4236 CDS
T01570
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPS_4236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_4236
Enzymes [BR:
ppt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPS_4236
DNA repair and recombination proteins [BR:
ppt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPS_4236
Prokaryotic type
PPS_4236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEJ14773
LinkDB
All DBs
Position
complement(4800644..4801348)
Genome browser
AA seq
234 aa
AA seq
DB search
MEGPMTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSEYAAGKEIYPPGPLIFNALNS
TPLDQVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYL
QSWAEQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGSHAQSK
QKLIDGTKHLVLKSVHPSPLSAYRGFLGCGHFSRANSFLEQRGLAPINWALPPL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccccatgactgacgacgatcgcatcaaactcgaacccagctggaaggccgcc
ttgcgcgcggaattcgaccagccctacatgcatcagttgcgcgagttcctgcgcagcgag
tacgccgccggcaaagagatctacccgccagggccgttgatcttcaacgcgctcaactcg
acgccgctggaccaggtgaaggtggtcatccttggccaggacccttaccacgggccgggc
caggcgcatggcctgtgcttctcggtgcagccgggcgtggccacgccaccgtcgctggtc
aacatctacaaggagctgcagcgcgacctgaacatcccgattgccagtcatggctacctg
cagagctgggccgagcagggtgtgctgttgctcaacacgaccatgaccgtggagcgcgcc
aatgccgcgtcgcatgccaagaagggctgggagttctttaccgaccggatcatccaggtg
gttagcgagcagtgcccgaacgtggtgttcctgctgtggggctcgcatgcgcaaagcaag
cagaagctgatcgacgggaccaagcacctggtgctgaaatcggtgcatccatcaccgttg
tcggcttaccgtgggttcctggggtgcgggcatttcagccgggccaacagtttcctcgag
cagcgcgggctggcgccgatcaactgggcattgccaccgctgtga
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