Pseudomonas putida S16: PPS_4295
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Entry
PPS_4295 CDS
T01570
Name
(GenBank) tartrate/fumarate subfamily Fe-S type hydro-lyase, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00020
Citrate cycle (TCA cycle)
ppt00620
Pyruvate metabolism
ppt00720
Other carbon fixation pathways
ppt01100
Metabolic pathways
ppt01110
Biosynthesis of secondary metabolites
ppt01120
Microbial metabolism in diverse environments
ppt01200
Carbon metabolism
Module
ppt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppt_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPS_4295
00620 Pyruvate metabolism
PPS_4295
09102 Energy metabolism
00720 Other carbon fixation pathways
PPS_4295
Enzymes [BR:
ppt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
PPS_4295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
AEJ14830
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All DBs
Position
4868797..4870320
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AA seq
507 aa
AA seq
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MTVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSIAQILINSRMCAT
GHRPICQDTGIVTVFIRVGMDVRWDGATMSVDDMINEGVRRAYNLPENVLRASILADPAG
ARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTM
GAGWCPPGMLGIGIGGTAEKAAVMAKEVLMESIDIHELKARGPQNRLEEIRLELFEKVNQ
LGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPAELEAPSL
DAYPEIVWEAGPSARRVNLDAITPEEVASWKPGETILLNGKMLTGRDAAHKRMVEMLNRG
EELPVDLKGRFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERG
PAAIEAIKDNKAVYLMAVGGAAYLVAQAIRKSKVLAFAELGMEAIYEFEVKDMPVTVAVD
SNGESVHITGPALWQSKIAQSLAVEVK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatc
tcgtactaccaccccgtcgatttcatccaggccatgcacgaggcctatctgcgtgaagaa
tcgcctgctgcgcgcgattccatcgcccagatcctgatcaactcgcgcatgtgcgccact
ggccatcgcccgatctgccaagacaccggtatcgtcaccgtgttcatccgcgtgggcatg
gacgtgcgctgggacggcgccaccatgagcgtcgacgacatgatcaacgaaggtgtgcgt
cgcgcctacaatctgcctgaaaacgtcctgcgcgcttcgatcctggccgacccggccggt
gcccgcaagaacaccaaggacaacaccccggcagtgatccactactccatcgtccccggc
gacaaggtcgaggtcgatgtcgcagccaaaggcggcggctcggagaacaagtcgaagatg
gccatgctcaacccgtccgactcgatcgtcgactgggtactgaagactgtcccgaccatg
ggcgctggctggtgcccgcctggcatgctcggcatcggcatcggcggtaccgccgagaag
gccgccgtcatggccaaggaagtgttgatggagtccatcgacatccacgaactgaaagcc
cgtgggccgcagaaccgtctggaagaaatccgcctggaactgttcgagaaggtcaaccag
ctgggcatcggcgcccagggcctgggtggcctgaccaccgtgctcgacgtcaagatcatg
gactacccgacccacgccgcttcgctgccggtgtgcatgatccccaactgcgccgccacc
cgccacgcccacttcgtgctcgatggctccggcccggccgagctggaagcgccgtcgctg
gacgcctacccggaaatcgtctgggaagctggcccgagcgcccgtcgcgtcaacctcgac
gccatcaccccggaagaagtcgcgagctggaagccgggcgaaaccatcctgctcaacggc
aagatgctgaccggccgcgatgccgcgcacaagcgcatggtcgaaatgctcaaccgtggc
gaagagctgccggtggacctgaaaggccgcttcatctactacgttggcccggtcgacccg
gtcggtgacgaagtggtaggcccagccggcccgaccaccgccacccgcatggacaagttc
acccgccagatcctcgaacagaccggcctgctcggcatgatcggcaagtccgagcgcggc
cctgccgccatcgaagcgatcaaggacaacaaggccgtgtacctgatggccgtcggcggt
gctgcctacctggtggcccaggccatccgcaagtcgaaggtcctggccttcgccgagctg
ggcatggaagcgatctacgagttcgaggtcaaggacatgccggtgaccgtcgccgtggac
agcaacggtgagtcggtacacatcactggccctgccctgtggcagagcaagattgcccag
agcctggcagtcgaagtgaagtaa
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