Pseudomonas putida S16: PPS_4607
Help
Entry
PPS_4607 CDS
T01570
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03030
DNA replication
ppt03430
Mismatch repair
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPS_4607
03430 Mismatch repair
PPS_4607
03440 Homologous recombination
PPS_4607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppt03032
]
PPS_4607
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_4607
Enzymes [BR:
ppt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPS_4607
DNA replication proteins [BR:
ppt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPS_4607
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPS_4607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Pantoate_transf
Motif
Other DBs
NCBI-ProteinID:
AEJ15138
LinkDB
All DBs
Position
complement(5218239..5218844)
Genome browser
AA seq
201 aa
AA seq
DB search
MERIAVIDFETTGISPGAGCRATEVAVVMLEGGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPVDKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELSRIGRSRSQAFACSLLLS
RRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQHLAGVLRQSHGVQQLSHD
LLCRLQKTPAAKVREALARYC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtatcgctgtcatcgactttgaaaccaccggcatcagccccggcgccggctgc
cgcgccactgaggtggcggtggtgatgctggagggcgggcgcatcgtcgagcgctatcag
agcttgatgaacgcgggcgtgccggtaccggccttcgtcgccgggctcactggcatcacc
accgccatgctgcgcagtgcgccgccggtggacaaggtgatgaacgaagtggccgagttc
gttggtggtaccccgctgctggcacacaatgccgccttcgaccagaagttttgggactac
gaactgagccgcatcggccgtagccgcagccaggccttcgcctgttccctgctgctgtca
cggcgccttttgccggcggcaccgaaccacaagctgggcaccttgacccgctgggccggg
ctgccggataccggtaccgcgcaccgtgccatggccgatgccgaaatggccgccaacctg
ctgcaacacttggctggcgtgctgcgccagagccacggtgtacagcagctttcgcacgac
ctgctctgccgcctgcagaaaaccccggccgccaaggttcgtgaagctctggccaggtac
tgttag
DBGET
integrated database retrieval system
