Pseudomonas putida S16: PPS_4638
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Entry
PPS_4638 CDS
T01570
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03030
DNA replication
ppt03430
Mismatch repair
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPS_4638
03430 Mismatch repair
PPS_4638
03440 Homologous recombination
PPS_4638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppt03032
]
PPS_4638
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_4638
Enzymes [BR:
ppt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPS_4638
DNA replication proteins [BR:
ppt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPS_4638
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPS_4638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AEJ15169
UniProt:
F8G6P9
LinkDB
All DBs
Position
5251202..5252239
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLNKHLQGALAPVYVVSGDDPLLCQEAADAIRNAARQQGFDERQVFSADANFDW
GTLLQAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLVSLPKLDGSA
QKTKWGKALIEGAHCQFIQIWPVDVHQLPQWINQRLQQAGLSAQRDAVDLIAARVEGNLL
AAAQEIEKLKLLAEGNQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRQLAGLAQQFSQGVPLEKAFSQARPPVWDKRRPLVSKALQRLSAQ
RWAQLLQDAQRIDAQIKGQAEGSPWTGLARLSLLMAGQRLALPPE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcccaactcaacaagcacctgcaaggcgccctggcaccggtctac
gtggtcagcggcgacgacccgctgctgtgccaggaagccgccgacgccatccgcaacgcc
gcgcgccagcagggcttcgacgaacgccaggtcttcagtgccgacgccaacttcgactgg
ggcaccctgctccaggctggcgccagcctgtccctgttcgcccagcgccgcctgctggaa
ttgcgcttgccctcgggcaagcctggtgacaagggcgctgctgcgctgatggaatactgc
gccaaccctgccgaagacaccttgctgctggtcagcctgcccaagctcgacggcagcgcg
cagaagaccaagtggggcaaggcgctgatcgaaggtgcccactgccagttcatccagatc
tggccggtggatgtgcaccagctgccgcagtggatcaaccagcgcctgcagcaggccggc
ctgtcggcacagcgtgacgccgtcgacctgatcgccgcacgcgtggaaggcaacctgctg
gctgcagcgcaggaaatcgaaaagctcaagctgcttgccgagggcaaccagatcaccgtg
gagaccgtgcaggccgccgtcgccgacagcgcccgcttcgatgtcttcggcctggtcgat
gccattctcaacggcgaagctgcgcatgccttgcgtatgctcgaaggcttgcgcggtgaa
ggcgtggagccaccagtaattctctgggccctggcccgagagctgcgccaactggcgggg
ctggcccagcagttcagccagggtgtaccgctggagaaggctttcagccaggcccgccca
ccggtctgggacaaacgccggccactggtcagcaaggccctgcagcgcctgtcggcgcag
cgctgggcgcagttgctgcaagatgcccagcgtatcgatgcacagatcaagggccaggcc
gagggctcgccgtggactggcctggcgcgcttgtcgctgctgatggccggccagcgcctg
gcactccctcccgagtaa
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