Pseudomonas putida S16: PPS_4769
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Entry
PPS_4769 CDS
T01570
Name
(GenBank) toxin secretion ABC transporter protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ppt
Pseudomonas putida S16
Pathway
ppt02010
ABC transporters
ppt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPS_4769
03070 Bacterial secretion system
PPS_4769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppt02000
]
PPS_4769
02044 Secretion system [BR:
ppt02044
]
PPS_4769
Transporters [BR:
ppt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPS_4769
Secretion system [BR:
ppt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PPS_4769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_29
DUF87
AAA_22
AAA_21
AAA_30
NB-ARC
DUF6482
RsgA_GTPase
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEJ15300
LinkDB
All DBs
Position
complement(5399054..5401204)
Genome browser
AA seq
716 aa
AA seq
DB search
MVPDLTCGCNTSAIESGLVCLITLARYHDIAVSAEQLQHDHAPAGERFSTGAILRAFQQL
GLKAKHCSIDPNRLKHAPLPAIAVDTRGEYFIIARAEGEQVLVQDPGSRAPQALTSAELA
MRWSGELILVRSDAQLPHGLSRFDLTWFIPAVVKYRRLFGEVLVVSLVIQILALLTPLFF
QVVMDKVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGARLFRHL
IDLPAAYFQARRVGDSVARVRELENIRSFLTNNSITLLLDVVFTVVFIAVMFLYSGWLTL
VVVGSLPLYFLVSLVVTPLLRARIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQITRR
WNNQLAAYVSASFKTQNLSNLANESVGLIGKLVTVATLWLGARLVIDGELTVGELIAFNM
LAGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTVLPALAGQIELDRVC
FRYRPDGGEVVRDVSLKIAAGEVVGIVGRSGSGKSTLTRLIQRLYSPERGRVLLDGADLA
VADVASLRRQIGVVLQENVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDG
YETLVGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQ
RTVIIIAHRLSAVRHADRIVVMERGQIIEQGPHDELVGKPQGTYAYLYRLQLGAAV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcctgatttgacttgtgggtgtaataccagcgctattgaaagtgggctggtctgt
ctgatcacgctggcgcgttatcatgatatagccgtctctgccgagcagttgcagcacgac
catgcaccggcgggtgagcgattctcgactggcgcaatactccgggcatttcagcaacta
ggtctcaaggccaagcattgcagcatcgatccgaatcggcttaagcatgcgccattgcct
gccattgccgtggatacgcgtggtgagtatttcatcatcgctcgcgcggaaggtgagcag
gttctggtgcaagacccaggttcccgtgcaccgcaagcgctgacctcggcagaacttgcc
atgcgctggtcgggagaactcattctggttcgctccgatgcccagttgccgcatgggctg
tcgcgtttcgatctgacctggttcattccagccgtggtgaagtacaggcggctatttggc
gaagtgcttgttgtctccttggtcattcagatattggcgttgctgacacctctgttcttc
caagtggtaatggacaaagtactggtgcatcgtgggttgaccacactggatgttatcgcc
ctgggcttgttggtcgtggttctatttgaaacattgctgagtggtttgcgtacttatgtg
gcagctcatacagcgtcaaggattgatgtcgaactaggtgcaagactgttcaggcacttg
atcgatcttcccgccgcctactttcaggccaggcgagtcggtgactcggttgcccgagta
cgcgaactggagaacatcagaagtttcctgaccaacaacagtatcacgctgttgctagat
gtagtgttcacggtggtcttcatcgctgtcatgttcctttatagcggttggttgacgttg
gtggtcgtcggctcattgcctctatattttctcgtatccttggtcgttaccccactgcta
cgggcgcggatcgaccagagtttccagcgcggcgccgagaatcaagcatttctggtggag
gcggtgaacggcatcgatacgctgaagtcgatggccgtggaaccgcagattacccggcgc
tggaacaatcagttggctgcttatgtatcggccagcttcaagacccagaacctttccaac
ctcgcgaatgagagcgtaggcctgatcggcaagctggtcacggtcgccacgttgtggctg
ggtgcccgcctagtcatcgatggcgaactcacggtgggcgaactgatcgccttcaacatg
ctggcagggcgcgtctcgcaacccattatccggctggctcaactctggaccagcttccag
cagacaggcgtatcgattcaacgcctgggcgacattctcaacacccgtaccgaggtcaac
cagggcaagggtacggtgctgccagcactagccgggcagatcgagctcgatcgtgtgtgt
tttcgctaccggccggacgggggcgaagtcgtgcgcgatgtcagcctgaagattgctgcc
ggagaagtggttggcattgtaggtcgctcggggtcaggcaagagtacgctgacacgcctg
atccagaggttgtactcacccgagcgggggcgggtattgctcgacggtgctgacttggcg
gtagccgatgtggcttcactgcgtcggcagatcggtgtggtgctacaggagaacgtgctt
tttcggcgcaccgtgcgcgagaacatcgcccttggcaacccggcggcaccgcttgaagag
gtcatcgccgcagcgacgctggcgggggcccacgagttcatcctcgaattgccggatggc
tatgaaaccttggtcggcgagcacggtgccagcctgtcaggtggccagcgacagcgcatt
gccatcgcccgggcgctgttcggcaacccacgcatcctgattttcgacgaggccaccagc
gcgctggactatgagtccgaacggatcatccagcagaacatggcgcggatctgcgcgcag
cgcacggtgatcataattgcccatcggctttcggctgtacgccacgccgaccgcatcgtg
gtcatggagcgcgggcagatcatcgagcaagggcctcatgacgagttggtgggcaagcca
caaggcacctacgcctatctgtatcggctgcagcttggggctgccgtatga
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