Pseudomonas putida S16: PPS_5041
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Entry
PPS_5041 CDS
T01570
Name
(GenBank) AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
ppt
Pseudomonas putida S16
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppt03000
]
PPS_5041
Transcription factors [BR:
ppt03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PPS_5041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_Crp_2
HTH_IclR
HTH_5
HTH_1
Sigma70_r4_2
MarR_2
HTH_23
Rrf2
MarR
DUF7343
Sigma70_r4
TrmB
HTH_Tnp_ISL3
Phage_rep_O
LexA_DNA_bind
Fe_dep_repress
HTH_39
Motif
Other DBs
NCBI-ProteinID:
AEJ15568
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Position
complement(5722799..5723359)
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AA seq
186 aa
AA seq
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MVAVFFRYDLIISLYWRIDLFIKLFDGEFSMHSELDAYDRRILELLQEDASLSSAQIAER
VGLSQSPCWRRIQRLKEEGVIRGQVTLLDRKKVGLNTQIFAEVKLNAHGRSNFTEFTDAI
RGFPEVLECYVLMGSVDFLLRIVTPDIEAYERFFFEKLSNVPGIQEVNSIVALSEIKSTT
SLPLSR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttggttgcggtattttttcgctatgatttgatcatttcgctgtattggcgaattgatcta
ttcataaagttattcgatggagaattttctatgcacagcgagctggatgcctacgaccgc
cgtatcctcgaactgctgcaggaggacgcttcgctgtccagcgcgcagatcgccgaacgc
gtggggctgtcgcaatcgccgtgctggcggcgtatccaacggttgaaggaggagggagtg
attcgtgggcaggtgaccttgctggaccgcaagaaggtcggcctgaacacgcagattttc
gccgaggtgaaactgaacgcccacgggcgctccaacttcacagagttcaccgacgcgatc
cgcgggtttccggaggtgctggagtgttatgtgctgatggggtcggtggactttctgttg
cgcatcgtcaccccggatatcgaggcttatgaacggttcttcttcgaaaaactgtcgaac
gtgccggggattcaggaggtgaactcgatcgtggcgctgtcggagatcaagtccaccacc
agcctgccactgtcgcgctga
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