Pseudomonas putida KT2440: PP_0133
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Entry
PP_0133 CDS
T00114
Symbol
algB
Name
(GenBank) Alginate biosynthesis transcriptional regulatory protein AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP_0133 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppu02022
]
PP_0133 (algB)
Two-component system [BR:
ppu02022
]
NtrC family
KinB-AlgB (alginate production)
PP_0133 (algB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
VpsR
cREC_REC
HTH_23
AAA_22
AAA_2
AAA_19
Xre-like-HTH
AAA_16
HTH_29
MCM
HTH_50
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAN65767
UniProt:
Q88RJ6
LinkDB
All DBs
Position
complement(140500..141846)
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AA seq
448 aa
AA seq
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MESAQDNQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEIRKPKDGLDSHSPAMMAVLETARQVAITDANILILGESGTG
KGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRF
REDLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRW
PGNIRELRNVVERASIICPQERVEISHLGMGEQPAGSAPRVGAALSLDELERAHIGAVLA
ASDTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagcccaggacaaccaaggccgaattctgctggtggatgacgagtccgcgatc
ctgcgcacgttccgctactgcctggaagacgagggctacagcgtggccacggcgaacagc
gccgcccaggcagaaaccctactgcaacgccaggtgttcgacctatgcttcctcgatttg
cgcctgggtgaagacaacggcctcgacgtgctggcacagatgcgtatccaggccccgtgg
atgcgggtggtgatcgtcaccgcgcactcggcgatcgacactgcagtagacgcaatccag
gccggcgctgcagactacttggtcaagccatgcagccccgaccagttgcgcctggccact
gccaagcaattggaggtgcgccagctttctgcacgcctggaagcgctggaaggtgaaata
cgcaaacccaaggacggcctcgactcccatagcccggccatgatggcggtgcttgaaacc
gcccgccaagtcgccatcactgacgccaacatcctcatccttggcgaatcgggtaccggc
aagggcgagctggcacgggccatccatggttggagcaagcgtgcacgcaaagcctgcgtg
accatcaactgcccgtcgcttaacgccgagctgatggaaagcgagctattcggtcatacc
cgcggcgccttcaccggcgccagcgaaagcaccctcgggcgggtcagccaggctgacggg
ggcacgctattcctcgacgagatcggcgatttcccgctgaccttgcagcccaaactgttg
cgtttcatccaggacaaggaatacgaacgcgtcggcgacccggttacccggcgtgccgat
gtacgtatcctggctgccaccaacctcaaccttgaagagatggtgcgcgaaagccgcttt
cgcgaagacctgctgtatcgcttgaacgtgattaccctgcacctgcccccgctgcgcgag
cgcagtgaagacatcctcatcctggccgaccgcttcctcgcccgtttcgtcaaggaatac
tcccggcccgcccgcggtttcagtgacgaggcgcgaaccgccctgctcaactaccgctgg
cctggcaacattcgtgaactgcgcaacgtagtggaacgggccagcatcatctgcccgcag
gaacgcgtggagatcagccacctgggcatgggtgaacaacccgccggcagtgccccgcgc
gtaggtgccgcacttagcctggatgagctggagcgtgcccatatcggtgccgtactggcc
gccagcgataccctcgaccaagccgccaagaccttgggcatcgatgcttctaccctgtac
cgcaagcgcaagcagtacaacctatga
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