Pseudomonas putida KT2440: PP_0213
Help
Entry
PP_0213 CDS
T00114
Symbol
gabD-I
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00250
Alanine, aspartate and glutamate metabolism
ppu00310
Lysine degradation
ppu00350
Tyrosine metabolism
ppu00650
Butanoate metabolism
ppu00760
Nicotinate and nicotinamide metabolism
ppu01100
Metabolic pathways
ppu01120
Microbial metabolism in diverse environments
Module
ppu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PP_0213 (gabD-I)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PP_0213 (gabD-I)
00310 Lysine degradation
PP_0213 (gabD-I)
00350 Tyrosine metabolism
PP_0213 (gabD-I)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PP_0213 (gabD-I)
Enzymes [BR:
ppu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PP_0213 (gabD-I)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PP_0213 (gabD-I)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PP_0213 (gabD-I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAN65845
UniProt:
Q88RC0
LinkDB
All DBs
Position
263250..264692
Genome browser
AA seq
480 aa
AA seq
DB search
MQLKDAQLFRQQAYINGEWLDADNGQTIKVTNPATGEVIGTVPKMGTAETRRAIEAADKA
LPAWRALTAKERSAKLRRWFELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFA
EEAKRIYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALVELAHRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQ
LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAEKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGGKL
IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagacgctcagttgttccgccagcaagcctatatcaatggtgagtggctg
gatgcggacaacggccagaccatcaaggtgaccaacccggccaccggcgaagtcatcggt
accgtgccgaagatgggtaccgcggaaacccgccgcgccatcgaagccgccgacaaggcc
ctgccggcctggcgtgccctgactgcgaaagagcgctcggccaagctgcgtcgctggttc
gaactgatgatcgagaaccaggacgacctggctcgcctgatgaccaccgaacagggcaag
ccgctggccgaagccaagggcgaaatcgcctacgctgcctcgttcatcgagtggttcgcc
gaagaagccaagcgcatctacggtgacaccatcccgggccaccagccagacaagcgcctg
attgtcatcaagcagccaatcggcgttaccgcggccatcactccgtggaacttcccggcc
gccatgatcacccgtaaagccggcccggccctggccgctggctgcaccatggtcctcaag
ccggcttcgcaaaccccatactccgctctggccctggtcgagctggcccaccgtgccggc
atcccggctggcgtgctgagtgtggttaccggcagcgccggcgaagttggcggcgaactg
accggcaactccctggtacgcaagctgtccttcaccggctcgaccgaaatcggtcgccag
ctgatggaagaatgcgccaaggacatcaagaaggtttccctggagctgggtggcaacgcc
ccgttcatcgtgttcgacgacgccgacctggacaaggcggtcgagggcgcgatcatctcc
aagtaccgtaacaacggccagacctgcgtctgcgccaaccgtatctacgtgcaggacggc
gtctacgacgcgttcgccgagaagctggccgctgcagttgccaagctgaagatcggtaac
ggcctggaagaaggcaccaccactggcccgctgatcgatggcaaggctgtcgccaaggtc
caggaacacatcgaggacgccgtcagcaaaggcgccaaagtgctgtccggtggcaagctg
atcgaaggcaacttcttcgagccgaccatcctggttgacgtaccgaagaccgctgctgtc
gccaaggaagagacgttcggcccactggcgccgctgttccgcttcaaagacgaagccgaa
gtcatcgccatgtccaacgacaccgagttcgggctggcctcgtacttctacgcccgcgac
atgagccgtgtgttccgtgtcgccgaagccctggaatacggcatggtgggtatcaacacc
ggcctgatctccaacgaagtggcgccgttcggtggtatcaaggcttcgggcctgggccgc
gaaggttccaagtacggtatcgaggactacctcgaaatcaaatacctgtgcatcagcgtc
tga
DBGET
integrated database retrieval system
