Pseudomonas putida KT2440: PP_0322
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Entry
PP_0322 CDS
T00114
Symbol
glyA-I
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00260
Glycine, serine and threonine metabolism
ppu00460
Cyanoamino acid metabolism
ppu00630
Glyoxylate and dicarboxylate metabolism
ppu00670
One carbon pool by folate
ppu00680
Methane metabolism
ppu01100
Metabolic pathways
ppu01110
Biosynthesis of secondary metabolites
ppu01120
Microbial metabolism in diverse environments
ppu01200
Carbon metabolism
ppu01230
Biosynthesis of amino acids
ppu01240
Biosynthesis of cofactors
ppu04981
Folate transport and metabolism
Module
ppu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PP_0322 (glyA-I)
09102 Energy metabolism
00680 Methane metabolism
PP_0322 (glyA-I)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PP_0322 (glyA-I)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PP_0322 (glyA-I)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PP_0322 (glyA-I)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PP_0322 (glyA-I)
Enzymes [BR:
ppu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PP_0322 (glyA-I)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAN65953
UniProt:
Q88R12
LinkDB
All DBs
Position
386861..388114
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctaccct
ggcaagcgttactacggtggctgcgagcacgtagacaaggtagaagccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgcaaacgtccaaccgcactccggctcgtcg
gccaacggcgcggtctacctggccctgctgcaagccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaaactgtac
aacgcagtccagtacggcatcgacaccaacaccggcctgatcgactacgacgaagtcgag
cgcctggcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactccaag
accctcgacttcccacgtttccgcgccatcgccgacaaggtgggcgcactgctgttcgtc
gacatggcccacgttgccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgacgtggtcaccaccactacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaaaaagctgaacgccgctgtattcccgggtgcc
cagggtggcccgctgatgcacgtgatcgctgccaaggcagtgtgcttcaaggaagcgctg
gagcctggattcaaggcctaccagcagcaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgtggctacgatgtggtttccggtggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgactggcaaagacgccgacgccgccctgggtcgtgcg
catatcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacttcg
ggcctgcgtatcggcaccccggccgtcaccacccgcggcttcaaggtcgcccagtgcgtg
gccctggctggctggatttgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctgtgcgcagatttccctgtctaccgctga
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