Pseudomonas putida KT2440: PP_0353
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Entry
PP_0353 CDS
T00114
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03030
DNA replication
ppu03430
Mismatch repair
ppu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP_0353
03430 Mismatch repair
PP_0353
03440 Homologous recombination
PP_0353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppu03032
]
PP_0353
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_0353
Enzymes [BR:
ppu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP_0353
DNA replication proteins [BR:
ppu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP_0353
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP_0353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF6621
Motif
Other DBs
NCBI-ProteinID:
AAN65984
UniProt:
Q88QY1
LinkDB
All DBs
Position
complement(429669..430379)
Genome browser
AA seq
236 aa
AA seq
DB search
MSLFAWLRPSAPELDHTTRQRLARLPKPVPLGVCTLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPSALAAGCDPAEALLDLLDFIG
NSPVLAFHAPFDQRMLARALKESLGYRLQSPFLDIAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRKMQSHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgccccagcgcgcccgagctggaccacaccacacgccag
cgcctggcccggttgcccaagcccgtgccgctgggggtatgtaccctgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcgggctcaaccccaaccgtgatcaggtactgtcg
atcggggcggtggccatcgaagacggtgccatcgactttgcccagcagttcgaacgcaca
ctgcaccggcctttgcagaagaccaacgccagcgtactgatccacggtttgggccccagc
gccctggctgccggttgcgacccggccgaggccctgctggatttgctcgatttcattggc
aacagcccggtgctggcgtttcacgcgccattcgaccagcgcatgctggcgcgtgcgctg
aaagagagcctgggttaccgcttgcagtcgccattcctcgatatcgccgagctggcgccg
atgctcaaccccgacaccgtgctgcgcgaggccgggctggatgactgggtagcgcggttt
ggcttgcaggttgaagaacgccatcatgccagtgccgatgcccaggtgaccgcagaactg
gcgctgatcctgttcagccaggcccggcgccagcagctggacagcccgctgcagctggag
caacggttgcgcgggtggcgacggcgcaagatgcagagtcatggtttgtag
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