Pseudomonas putida KT2440: PP_0483
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Entry
PP_0483 CDS
T00114
Symbol
uvrA
Name
(GenBank) excinuclease (uvrABC system protein A)
KO
K03701
excinuclease ABC subunit A
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP_0483 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_0483 (uvrA)
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP_0483 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP_0483 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_23
AAA_22
RsgA_GTPase
BCA_ABC_TP_C
AAA_33
AAA_21
nSTAND3
Viral_helicase1
DnaJ_CXXCXGXG
cobW
AAA_25
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AAN66113
UniProt:
Q88QK7
LinkDB
All DBs
Position
complement(566661..569495)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN
GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
QGEETIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNTELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGEASNYFGQLTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIVVP
AKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLYPLAATA
LNGASSLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcctgattcgtggggcacgtacccacaacctgaagaacatcgacctgacc
ctgccccgggacaagttgatcgtgatcaccggcctgtccggttccggcaagtcgtccctg
gcgttcgataccttgtacgccgaaggccagcgccgctatgtggaatcgctgtcggcctac
gcccggcagttcctgtcgatgatggaaaagcccgacgtcgacaccatcgaaggcctgtcg
ccggcgatttcgatcgagcagaagtcgacctcgcacaacccgcgctccacggtcggcacc
atcaccgaaatctacgactatctgcgcctgctgtacgcccgcgtcggtactccacgctgc
ccggaccacgatatcccgctggaggcgcaaacgatcagccagatggtcgacctggtgctg
gagcgcccggaaggcagcaagctgatgctgctcgcgccagtggtgcgcgagcgcaagggc
gagcacctggcggtgtttgacgagcttcgcgcccagggcttcgtgcgggccagggtcaac
ggcaagctctacgaactcgatgagttgcccaagctggacaaacagaagaagcacagcatc
gatgtggtggtggaccgcttcaaagtccgcgccgacctgcaacaacgcttggccgaatcg
ttcgagaccgcgttgaagctggccgacggtattgccctggtggcaccgatggacgacgaa
caaggcgaagagacgatcttctccgcgcgcttcgcctgtccggtgtgcggccacgcgatc
agcgagctggaaccgaagctgttttccttcaacaacccggctggcgcctgcccgacctgc
gacggcctgggggtcaagcagttcttcgacaccaaacgcctggtcaacaccgaactgacc
ttggccgaaggcgcgatccgcggctgggaccggcgtaacgtgtactacttccagatgctc
ggttcgttggctgcgcactacggcttcagcctggaggagcctttcggcgagctgtcagcc
gaacaccagaaagtgatcctgcagggcagcggcaagcagagtgtcgatttcaagtacctc
aacgaccgaggcgacatcgtcaagcgatcgcacccgttcgaaggcattgtgccgaacctt
gagcgccgctaccgcgaaaccgaatcggccaccgtgcgtgaagaactggccaaattcctt
ggcacgcaaccgtgcccggattgccggggtacgcgcctgcgccgcgaggcgcgccatgtg
tgggtgggcgagaaaaccctgccggcggtaaccaatttgccgatcggtgaagccagcaac
tactttggtcaactgacccttactggccggcgtggcgaaatcgcggcaaaaatcctcaag
gaaatctgcgaacgacttcagttcctggtcaatgtcggtctcgactacctgaccctggat
cgtagcgccgacaccctgtccggcggtgaagcgcaacgtatccgactcgccagccagatc
ggcgctggtctggtgggggtgatgtacatcctcgatgaaccgtccatcggccttcatcaa
cgcgacaacgaccgcctgttggccaccctcaaccatttgcgcgacctgggcaacacggtg
atcgtggtggaacacgacgaggacgccattcggctggccgactacgtggtcgatatcggc
ccgggcgccggtgttcacggtgggcagattgtcgccgagggctcgccccaggaggtcatg
gaccatcccgattcgctgactggcaagtacctgtccgggcgcaagaagatcgtcgtgccg
gccaagcgcacgccgcgcaacaagaagctgcagctcaagctcaagggcgcacgtggcaac
aacctgcagaacgtcgacctggaagtaccgatcggcctgctgacctgcgtgactggtgta
tccggctcgggtaaatcgacgctgatcaacaataccctttaccccttggccgccaccgcc
ctcaatggcgcaagcagcctggaagccgcaccgcacagcagcatggacggcctgcagcac
ctggacaaggtggtggatatcgaccagagcccgatcggccgcacaccacgctccaacccg
gccacctacaccggcatcttcacgccgatccgcgagctgttctccggtgtcccggagtca
cgctcgcgtggttatggcccggggcgtttctcgttcaacgtcaagggtggccgttgcgag
gcctgccagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctacgtg
ccgtgtgacgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaagtacaag
ggcaagaacatccacgaggtgctggaaatgaccatcgaggatgcccgcgagttcttcgat
gcggtgccggcgctggcgcgcaagctgcaaacattgatggatgtgggcctgtcgtacatc
aaactggggcaatcagcgaccacgttgtccggcggtgaggcgcagcgggtaaagctgtcg
cgcgaactgtccaagcgcgataccggcaagaccttgtacatcctcgacgaacctaccacc
ggcctgcactttgccgatatccagcaactgctggacgtattgcatcgcctgcgcgaccac
ggcaataccgtggtggtgatcgagcataacctggatgtgatcaagactgccgactggctg
gttgacctggggcctgagggcggttccaagggtgggcagatcattgcctgcggtacacca
gaagagctgagcgagatgaagcagtcatataccggccattacctgaaaccattgctggag
cgggatagggcctga
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integrated database retrieval system
