Pseudomonas putida KT2440: PP_0557
Help
Entry
PP_0557 CDS
T00114
Symbol
acoR
Name
(GenBank) Acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppu03000
]
PP_0557 (acoR)
Transcription factors [BR:
ppu03000
]
Prokaryotic type
Helix-turn-helix
Other families
PP_0557 (acoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
AAA
HTH_17
AAA_5
HTH_30
AAA_2
HTH_29
AbiEi_4
HVO_A0261_N
HTH_50
HTH_28
Xre-like-HTH
RWP-RK
HTH_7
HTH_22
IclR_C
AAA_16
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AAN66184
UniProt:
Q88QD7
LinkDB
All DBs
Position
646378..648231
Genome browser
AA seq
617 aa
AA seq
DB search
MLAANSRAHVDCVSRVLKNADRLPQAPVPPLILDSWRRSMDVYRLDPGSQQGPRILSQSL
LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDAQGRTIDYRVESAIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPLGELLGVVD
VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSAQGHWVMRAHGTPGYVESQPDYLLA
WDADGRLQAINSLARQRLVERLGRLPEHIGELFDIDQLRRVSASSAQRLPGLGGLYGRVS
APQQRQRAQPLRQAQDTRIEQHLRLATRVKDCNLAVLVLGETGAGKEVFARQLHQQSQRC
DGPFVTLNCAAIPESLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLN
LQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAAMVEDGRFREDLYFRLANARFE
LPPLRERDDRLGLIHQLLAEEAAACGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACA
VSEGGQVRLQDLPQEVRGEAVGSAESGVSCPARQLLLDALIRHRWKPADAARALGISRAT
LYRRVHEHRIDMPRMKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactcccgagcccatgtggactgcgtcagcagggtgttgaagaatgcc
gaccgcctgccgcaggcgccggtaccaccgctgatcctcgattcatggcgccgctccatg
gatgtgtaccgcctcgaccccggttcccagcaggggccgcgtatcctttcccaaagcctg
ctcaacgaatgccgcgaacgcgccgagctgttcctgcgcatcgccagcgatgccgtggcg
cgcttgcatgagcgggtgcgcggcgctgactactgcgtgctgcttaccgatgcccagggg
cgcaccatcgattaccgggtcgagtcggccatccgcaacgactgtcgcaaggccgggctg
tatctggggacctgctggtcggagggcgaggagggcacatgcggcgtggcggcggtgctg
accagcaaggctccggtcacggtgcacaagcgcgatcactttcgcgccgccttcatcggc
ctgacctgcacagcggcgccggtgttcgacccgttgggtgagttgttgggcgtggtagat
gtgtcggccttgcagtcgccggacgatcggcgcagccagcacctgatccgccagttggtc
gagcaaacggcccgcgagatcgaaaacgccttcttcatgcacagcgcccagggccactgg
gtgatgcgcgcccatggtacgccgggctatgtggagagccagcccgactacctgctggcc
tgggatgccgatggccgcttgcaggcgatcaacagcctggcgcggcagcgcttggtggaa
cgcctggggcgcttgcccgagcatattggcgaactgttcgacatcgaccaactgcgccgg
gtgagcgcgtcgtccgcccagcgcctgcctggtctgggcggtttgtatggccgggtcagc
gcaccgcagcaacgccagcgtgcgcagcctttgcgccaggcccaggacacccgtatcgag
caacacctgcggttggccacgcgggtcaaggactgcaacctggcggtgctggtactgggt
gagaccggggccggcaaggaggtattcgcccgccagttgcaccagcaaagccagcgctgt
gatggcccgttcgttaccctgaactgcgcggccatcccggaaagcctgatcgagagcgag
ttgttcggctatgtggccggggccttcaccggggcttccagcaaaggcatgcaagggctg
ttgcagcaggccgatggcggcacgctgttcctcgacgagatcggggacatgccgctgaac
ctgcaaacccgcctgctgcgggtgctggcggagggcgaggtggcgccgctgggggccgcg
cggcgggagcgggtggatattcaggtgatctgtgcgacccatcgcgatctggcggcgatg
gtggaggacgggcgatttcgtgaagacttgtacttccgcctggccaatgcccgctttgag
ctcccccccttgcgtgagcgtgatgaccggctggggctgattcaccagttgctggccgaa
gaggctgcggcctgcggggtggaggtggtgttggcggatgacgcgctgcaggcgctgctg
gtttatcgctggccgggcaatttgcgccagctgcggcaggtgttgcggtatgcctgtgcg
gtgagtgagggcgggcaggtgcggctgcaggatctgccgcaggaggtgcgcggtgaagcg
gttggctcggctgaaagcggagtgtcgtgcccggcccggcagctgttgctggacgcgctg
atccgccatcgctggaagccggctgatgcggcacgggctttgggcatttcgcgggcgacg
ctttatcggcgagtgcatgagcaccgcatcgacatgccgcggatgaaggggtag
DBGET
integrated database retrieval system
