Pseudomonas putida KT2440: PP_0949
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Entry
PP_0949 CDS
T00114
Name
(GenBank) putative ATP-binding protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppu03019
]
PP_0949
Messenger RNA biogenesis [BR:
ppu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PP_0949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
SKI
mTERF
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAN66574
UniProt:
Q88PA1
LinkDB
All DBs
Position
complement(1092845..1093699)
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AA seq
284 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDSGFYCIDNLPAGLLPQLAENALINTELLQPKVAVSID
ARNLPSHLMRFPELLEEARARHIQCDVLYLDADEEVLLKRFSETRRRHPLTNANRSLAEA
IRVESDLLGPIADLADLKIDTTNLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREHSGLDQPVIDYLAAQPDVEDMYNDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYITERLGRQLQQTLKNVQVRHRDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcatcgtcagcggccggtccggctccggcaagagcaccgccctcgatgtc
ctggaagacagcggtttctattgcatcgacaatctgcccgccgggctactgccgcagttg
gcggaaaatgcactgatcaacaccgaattgctgcagcccaaggtggcggtttcgatcgac
gcgcgcaacctgcccagccacctgatgcgttttcccgagctgcttgaagaagcccgcgca
cggcacatccagtgcgacgtgttgtacctggatgccgatgaagaggtccttctcaagcgt
ttctcggaaacccgcaggcggcaccccctgaccaacgccaaccgctcgctcgcggaagcg
atccgcgtggaaagcgacttgttggggccaattgccgacctggccgacctgaagatcgac
accaccaatctgaacctgtaccagttgcgtgactcgatcaagctgcgcctgctcaaccag
cccgagcctggcacagcgtttctggtcgagtcgttcgggttcaaacggggcatgccggtc
gacgccgacctggtttttgacgtgcgctgcctgcccaacccctactggaaaccggaactg
cgtgagcactcgggcctcgatcaacccgtgatcgactacctggccgcacaaccggatgtc
gaagatatgtacaacgacatctccagctacctgctcaaatggttgccccgcttcgctgcc
agcaaccgcgcctacgtaaccattgccatcggctgcaccggcggacatcaccgttcggtg
tacatcaccgagcgccttggtcgacagctgcagcaaaccctgaaaaacgtccaggtccgc
catcgcgacctctag
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