KEGG   Pseudomonas putida KT2440: PP_1103
Entry
PP_1103           CDS       T00114                                 
Name
(GenBank) ATP-dependent helicase, DEAD box family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppu  Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppu03400]
    PP_1103
Enzymes [BR:ppu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PP_1103
    5.6.2.6  RNA 3'-5' helicase
     PP_1103
DNA repair and recombination proteins [BR:ppu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PP_1103
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 ARPP-1 AAA_25
Other DBs
NCBI-ProteinID: AAN66728
UniProt: Q88NV1
LinkDB
Position
complement(1259000..1261450)
AA seq 816 aa
MPAATDLANAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKP
RPQGRHLAPIQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNSAERARQARR
LPSVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARLRHWHP
GLPTWGLSATLGNLQHARDVLLPQGGLLVQGRQDKALQVDTLLPKAIERFPWAGHMGLKM
LDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLARDTRDWVERS
LKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRVTLVP
THSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPEQLLAEVRSTW
AFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLARRHRMGIGTIV
SDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTA
RKAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQAQWSALPTTS
TLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVNDYGFELLSPA
QVDWASHLPQALGTADLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSTRQIQ
ASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQLDLQALRRPGPL
AFALLVEGMRETLSTEKLADRIARMVAELEQAANAG
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcctgctgctaccgacctcgccaatgcctggtttgccaagcgcggctggaagcccttc
gccttccagcggcgcgtatgggctgccgtcgaacggggcgaatccggtttgctgcatgcc
agtaccggtgccggcaagacctacgcggtctggctcgcggcgctgcgtgcgttcaagccc
aggccccagggccgccacttggcccccatacaggtgctgtgggtgacgcccatgcgtgcc
ctggccgccgacactgcacgtgcgttacaagcgccgcttgatgagctccagctgccttgg
agcgtaggggtgcgcagcggcgacaccaacagtgccgagcgcgcccgacaggcccggcgg
ctacccagtgtgctgatcaccacccccgaaagcctgaccctgctgctgacccgggcaaag
gcacgtgaggatttcgccacgctgcaactggtggtggtggatgaatggcacgagctgctt
ggcaacaagcgcggggtacaactgcagctggccttggcgcgcctgcggcattggcacccg
ggcctaccgacctggggcttgtcggcaaccctcggcaacctgcaacacgcacgggatgtc
ttgctgccccagggcggcctgctggtgcaaggccggcaagacaaggcactgcaagtcgac
accctgctgccaaaagcgatcgagcgcttcccttgggctggacacatgggcctgaagatg
ctcgaccaggtctgtcacgagatcgatgccagtgccagtagcctggtgttcaccaacacc
cgcgcccaggcagaaatctggtatcaggccctgcttgaggcccgcccggactgggccggg
ctgatcgccctgcaccacgcctcgctggcccgcgatacccgcgactgggtcgagcgcagc
ctcaagcaaggcagcctcaaggcggtgatctgcacgtccagcctggacctgggcgtggac
tttctgcccgtggaacgggtgctgcaaatcggctcggccaagggcatcgcccgcctgatg
cagcgggcgggtcgctcaggacacgcgcctgggcggcgctccagggtcaccctggtgccc
acccatagcctggaactggtggaagcggcggcggcccggcaggcgctgttagccggccac
atcgaagcccgcttttcaccgcgcctgtgcatggacgtgctggtacagcatctggtcagc
atggccttgggcagcggttttcgcccggagcaactgctcgccgaagtgcgcagcacctgg
gcttttcgccagttgcgcgacagccaatggcaatgggcgctggacttcgtctgccacggc
ggcagctcattgaccgcctacccggactaccagcgtgtcgagcgccaggccgacggagtt
taccgggttaccagcgaacgcctggcgcggcgccaccgcatgggcatcggcaccatcgtc
agcgatgccaacctgcaactgaaatactggagcaagggcggcggcgggaaaacgctgggc
agtgttgaagaagcgttcatcgcccgcctgcgccccggcgataccctggtgtttgccggg
cgggtactagagctggtacgcgtggaaaacatgacggcctatgtgcgtcgcagcacggcg
cgcaaggctgcggtagcgcgctggaacggcgggcgcatgccgctctcgagcgaactggcc
gatgcgctggtcgagcagctcgatgctgccgcccatgaacgctttgaggggccggaaatg
cgcgcagtacgcccgctgcttgcgcttcaagcgcagtggtcagccttgcccaccacaagc
acactgctggccgagaccttcaaatcccgccagggctggcacctgttcctgtatcccttt
gccgggcgcatggccaacctgggcttggccaatctgattgcctggcgggtcagccgcgca
cagccgctgtcggtgtcgattgccgtcaacgattacggattcgaactcctcagccctgcc
caggtggactgggccagtcacctgccgcaagcactcggcaccgcggacctgctggaagat
gtgctggccagcctgaatgccggggagatggcactgcggcgctttcgtgaaattgcccag
attgccgggctggtgtttggcggctatcccgccgcgcagaagagcacgcggcaaatccag
gcctccagcgggctattctatgaggtgtttcgcaagcatgacgcggggaatttgctgctt
ggccaggcgcgggatgaagtattgagcgaagagctggaaatcgaacggctgcatcggcaa
ctgctgaaaatgagtgagttgcaactggacctgcaggcgttgaggcggccagggccactg
gcgtttgccttgttggtggaaggcatgcgcgagacattgagcaccgagaagctggcagac
cgcattgcgcggatggtggcggaactggaacaagcggcgaacgcgggatga

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