Pseudomonas putida KT2440: PP_1372
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Entry
PP_1372 CDS
T00114
Name
(GenBank) conserved protein of unknown function
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_1372
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PP_1372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
SLFN-g3_helicase
ResIII
T2SSE
AAA_30
AAA_10
CbiA
TrwB_AAD_bind
AAA_19
AAA_7
SRP54
Hydrolase
DUF2379
AAA_6
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
AAN66995
UniProt:
Q88N44
LinkDB
All DBs
Position
1562259..1563734
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AA seq
491 aa
AA seq
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MSEFSTIVVGAGPDGQPVGQAMRLANRHGLVAGATGTGKTVTLQRLAEVFSDAGVAVFAA
DVKGDLCGLGAAGAPQGKVAERIAGMPWLGHTPRAYPVSLWDIAGQSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFKVADREGLLLLDLKDLKALLAHLKDNPQLLGEDSALMTT
ASTQALLRRLATLEQQGAEALFGEPALQLEDLLRPDPDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDAVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPTFDTLAVLTEL
GIGEALVGTLQEKGTPAMVQRVLVAPPQSRIGPLSAAERSALIAASPLAGRYDKPVDRES
AYEMLSQRKGEPVEPAPQPKADEESFADKAGEFLQSAAGQAIKSAVRQAANQLGRQLVRG
LMGSLLGGKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattttcgaccatcgttgtaggcgcgggcccggatggccagccagtcgggcaa
gcaatgcgcctggccaaccgccacggtctggtggctggcgcaaccggtactggcaagacc
gtcaccctgcagcgcctggcggaggtgttcagcgacgcaggggtggcggtgttcgccgcg
gatgtcaaaggcgacctttgtggcctgggtgctgccggtgcgccacagggcaaggtggct
gagcgcatcgccggcatgccgtggctggggcatacgcccagggcttacccggtgagcttg
tgggatatcgccgggcagtctggccacccgctgcgcaccaccctcagtgaaatggggccg
ttgttgctgggcaacttgctggaactgaccgacagccagcaggcggcgctttatgcagca
ttcaaggtggccgaccgcgaaggcctgctgctgctggacctcaaagacctcaaggccctg
ctggcgcatctgaaggacaacccgcagctgctcggcgaagacagcgcgctgatgaccacg
gcctccacccaggctttgttgcgccggctcgctaccttggagcagcagggcgccgaggca
ctgttcggcgagccggcattgcaactggaggacctgctgcgccctgatccggatggacgt
ggacgtatccacctgctcgatgccagccgattggtgcacgaggcacccaaggtgtacgcg
acgttcctgttgtggctgctggccgaactgttcgagcagttgcccgagcgcggtgatgcc
gacaagccggtgctggcgctgttcttcgatgaagcacacctgctgttcaacggcacgccc
aaggcgttgcaggaccgtcttgagcaagtggtccggctgatccgctccaagggggtgggg
gtctatttcgttacccagtcgccgggtgacttgcccgacgcggtgctggcccagttgggc
ttgcgcattcagcacggcttgcgggcgttcacggccaaggagcagaagtcgctgcgggcg
gtagccgatggtttccgccccaacccgacgttcgacactctggcggtgctgaccgaactg
ggtattggcgaagcgctggtgggtacgttgcaagagaagggcacgccggccatggtgcag
agggtgctggttgcaccgccgcagtcgcgtatcgggccactgagtgcggctgagcgcagt
gcgctgattgccgcttcgccactggcggggcgctatgacaaaccggtggaccgtgagtca
gcctatgaaatgctgagccagcgtaagggcgagccggtggaaccggcgccgcaaccgaag
gcggatgaagagagttttgccgacaaggcgggtgagttcttgcagagtgcagcggggcag
gcgatcaagtcggcagtgcgccaggccgctaaccagttggggcggcagttggtgcgcggg
ttgatggggtcgttgttagggggcaagaaaaggtag
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