Pseudomonas putida KT2440: PP_1889
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Entry
PP_1889 CDS
T00114
Symbol
fimD
Name
(GenBank) Type 1 pili subunit FimD
KO
K07347
outer membrane usher protein
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP_1889 (fimD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppu02000
]
PP_1889 (fimD)
02044 Secretion system [BR:
ppu02044
]
PP_1889 (fimD)
02035 Bacterial motility proteins [BR:
ppu02035
]
PP_1889 (fimD)
Transporters [BR:
ppu02000
]
Other transporters
Pores ion channels [TC:
1
]
PP_1889 (fimD)
Secretion system [BR:
ppu02044
]
Chaperone-usher system
Type 1 pilus assembly protein
PP_1889 (fimD)
Bacterial motility proteins [BR:
ppu02035
]
Pilus system
Fimbrial proteins
PP_1889 (fimD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
TcfC
Motif
Other DBs
NCBI-ProteinID:
AAN67508
UniProt:
Q88LP0
LinkDB
All DBs
Position
complement(2129703..2132198)
Genome browser
AA seq
831 aa
AA seq
DB search
MVLPPLRWRTMRRQRSALLCLLGSSTLLSAPYSQADSGFQSGFLRQVPGQPQAASAWSLS
MLTSDQGLAPGRYRVEVQVNLEPAGQHELDFQPGPDGELQPCLPARLLGEWGMRLDALAN
PEDQASACLDLLTVVPGAQIVFTPTELHLAISIPQISMRRNTANQVDPSRWDSGINAAFI
NYQASTLNGRNRSSGRYTSNDLYLNSGINLGEWRLRSTQSWRQGSQGKTEWTRAQTYAQR
DIPGTLANLTIGETFTDREVFRSVPISGVRVASDMGMLADNQRGYAPIIRGVAQSRAKVE
IWQHGYPIYSTYVSAGPYAIDDLSTAGSGELEVVVTEADGQVRRFIQPYSTMSNLLRPGV
WRYSATVGRYNPSSDLETPLLWQGTLAVGSYWDTTVYGGLMASEFYRAGNLGFSKDLGHL
GAVAFDVTQASSAIDNAHEREVQGSSYALKYAKAFTTQTNLRFAGYRYSTQGYRDFDEVV
RQRSQDTTFSGSRRSRLEASVHQSLGRTSSLTLTLSQQDYWRSNATQRQYQFNFNTQHRG
VGYNLFASQSLTDRYGNDRQFGLSVTVPLHFGHRANATFDLQHNANGYSQRATLSGSDSA
RALSYSTSLSRDEHARKTAALSLGHQAPYASVSAGYTEADNYRSLSLNASGAVLLHADGL
EFGRYLGDTAALIEVPGVANVGLQNATGTRTNSRGYALLPYLQPYRTNSVVLETDRLDPD
VEIDNGIAQVVPRQGAVVKHRFEARRVSRLVLTLHDTQGQPLPFGAQVLAENGTQLGMVG
QAGLVMLTNPSQEQPLQVSWGEQPNAGCQVHLDELDAPVVDGYRQQTLTCI
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccccccactacgctggcgcactatgcgccgccagcgcagcgcattgctgtgc
ctgctgggtagctccaccttgctctcagcgccctactcccaggcagactccgggttccag
agcggcttcctgcgccaagtgcctggccaaccgcaagcagcgagtgcctggtcgctgagc
atgttgaccagcgatcaggggctcgcgcctggccgctaccgggtagaggtacaggtcaat
cttgaacctgccggccagcatgagctggatttccagccaggcccggacggtgagctgcag
ccatgcctgccagccaggctgcttggcgaatggggaatgcgcctggacgcactggccaat
ccagaggatcaggcgagtgcctgcctggacttgctgactgtcgttcctggtgcacaaatc
gtcttcacccctacggagctgcacctggccatctcgattccgcagatctccatgcgccgg
aacaccgctaaccaggtcgacccttcccgctgggacagtggtatcaatgccgctttcatc
aactatcaggcctccaccctgaacggccgcaaccgctcctctggccgttacaccagcaac
gacctgtacctgaacagtggtatcaacctgggcgaatggcgcctgcgcagtacccagtcc
tggcgccagggcagccagggcaagactgaatggacccgggcacagacctacgcacagcgc
gatataccgggtaccctcgccaatctgacgattggcgaaaccttcacggacagggaggtg
ttccgttcggtgccgatatcaggcgtgcgcgtggcctcggacatgggcatgctggccgac
aaccagcgcggttatgccccgatcattcgcggcgtggcccagagccgggcgaaagtcgag
atctggcagcatggttatccgatctactcgacgtacgtcagcgccggcccctacgccatc
gacgacctgagtaccgcaggcagcggcgagctggaagtcgtcgtgaccgaggccgatggc
caggtccgccgcttcatccagccgtactcgaccatgagcaatctgctgcgcccaggcgta
tggcgttacagtgccacggtcgggcgctacaacccctccagcgacctcgagaccccgctg
ctctggcaaggcacgctggccgtaggctcctactgggacaccacggtttacggcggcttg
atggccagcgaattctaccgcgcgggcaacctggggtttagcaaggacctgggccacttg
ggcgcagtggccttcgatgtaacgcaggcgtccagcgcaatcgacaatgcccatgagcgc
gaggtgcagggttccagttacgccctgaagtatgccaaggccttcaccactcaaaccaac
ctgcgctttgccggatatcgctattcgacccaaggctaccgtgacttcgatgaagtggtg
cgccagcgcagccaggacactacgttcagcggcagtcgccgcagccgcctggaggcctcg
gtccaccagagcctgggcaggaccagctcgctgaccctgacgctgtcgcaacaggactac
tggcgcagcaatgccacccaacggcaataccagttcaacttcaatacccagcatcggggt
gtaggctacaacctgttcgcctcacaatcgttgaccgaccgttacggcaatgatcgtcag
tttggcctgagcgtgacggtacccttgcatttcggtcaccgcgccaatgcgaccttcgac
ctgcagcacaacgccaacggctacagccagcgtgccacgctcagcggcagcgacagcgcg
cgcgcgctgagctacagcaccagcctgagccgtgacgaacacgcccgcaagacagcggca
ctgtcgctcggccatcaggccccctatgccagcgtgagtgctggctataccgaagccgac
aactaccgcagcctgtcattgaatgccagtggtgcggtgctgctgcatgctgacgggctg
gagttcggccgatacctgggagataccgcggccttgatcgaagtccctggcgtggccaat
gtgggcctgcaaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccc
tacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgat
gtggaaatcgacaacggcatcgcccaggtagtgcctcgccagggtgcagtggtcaagcac
cgcttcgaggcacgccgcgtttcacgccttgtactgaccctgcacgatacccagggtcaa
ccgctgccctttggggcccaggtgctggccgagaacggtacccaactgggcatggtcggg
caggcgggcctggtaatgctcaccaaccccagccaggagcaaccgctgcaggtgagttgg
ggcgaacagcccaacgccggctgccaggtgcatctcgatgaactggacgctcccgtcgtc
gacggctatcgccagcaaaccctgacctgtatctag
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