Pseudomonas putida KT2440: PP_2025
Help
Entry
PP_2025 CDS
T00114
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_2025 (sbcD)
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PP_2025 (sbcD)
Archaeal homologous recombinant proteins
PP_2025 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AAN67639
UniProt:
Q88LB0
LinkDB
All DBs
Position
complement(2300118..2301356)
Genome browser
AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAALKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPVPRAVALQRVGPAPLGELLQQL
ADLPVVDLLEDPNRQPWLEVRVLLDEPQPDLRQQIETALEGKAVRLIRISAEYAGRNNAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADDQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccaactgcgcctgcgccagccg
gatgcgctgctgattgcgggcgacatcttcgacaccgtcaacccgcccgtcaaagcccag
gaacgcctctacgacttcatcgtccaggcccacgagcaacagcccaagctggacatcgtg
atgattgccggcaaccacgactccggttcgcgcatcgagctgccggccgcactcatgcgc
cgcctgcgcacccatgcgttgggccgtgtgcactggctggacgagggccagctggatgcc
gaacgcctgttgattccgctgaccaacggccgtggcaaggtggccgcctggtgcctggcc
ctgccgttcctgcgcccggccgaagtgaccggcccgcagctgggtgacgactacctgcaa
ggcatcacccaggtgcatcagcaactgatcgccgccgccctgaagaaacgcaagaaagac
caggcgctgatcgccatcagccacgcgcacatggccggtggcgcggtatcggaagactcc
gaacgcagcctgatcatcggcaacgccgaggcgctgccggccaagctgttcgacaaggct
atcagctacgtcgccctgggccatctgcacaagccgcagaaggtcaaccgcgaagagcgc
atccgctacagcggctcgccaatcccgctgtcgttcgccgaaatcaactacccgcaccag
gtcctggaagtggagttggacggtaacggcctggtcagcgtcgagccacgccccgtacca
cgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagcaactg
gccgacctgcccgtggtcgacctgcttgaagaccccaaccgccagccctggctggaggtg
cgggtgttgctcgacgagccgcaacccgacctgcgccagcagatcgaaaccgcgcttgaa
ggcaaggcggtacggctgattcgtatcagcgccgagtacgccggccgcaacaacgccgaa
gacgatgacctggcctttgtcgaactggcccagatgaccccgcaagacctgttcagccgc
gcctgggaacaagcctacggcaaccccgccgacgatcaggcgctggccgacttcgccctg
ctgttgcaggacgtgcagcaggaagaggaacagccatga
DBGET
integrated database retrieval system
