Pseudomonas putida KT2440: PP_2077
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Entry
PP_2077 CDS
T00114
Symbol
lysA-I
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu00300
Lysine biosynthesis
ppu00470
D-Amino acid metabolism
ppu01100
Metabolic pathways
ppu01110
Biosynthesis of secondary metabolites
ppu01120
Microbial metabolism in diverse environments
ppu01230
Biosynthesis of amino acids
Module
ppu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
ppu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP_2077 (lysA-I)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PP_2077 (lysA-I)
Enzymes [BR:
ppu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PP_2077 (lysA-I)
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Thiolase_C
Motif
Other DBs
NCBI-ProteinID:
AAN67691
UniProt:
Q88L58
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Position
complement(2364209..2365441)
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AA seq
410 aa
AA seq
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MTAPFTLLAEAVRQHGSPLWAYDTRTIADRVEQLNVFDTVRFAQKANPNLHVLRLMRAHG
LVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLHQ
LGERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVH
MHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWA
VARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVIIDAGFNDLMRPA
MYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLV
IHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLEADF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccttcaccctcttggccgaggcggttcgccagcacggctcgccactatgg
gcatacgacacccgcaccatcgccgatcgtgtcgagcagctgaacgtgttcgacaccgta
cgtttcgcccagaaagccaacccgaacttgcatgtgctgcgcctgatgcgcgcccatggc
ctggtgctggacgccgtgtcgctgggtgagatggaacgggccttcgccgccggcgcgagc
gttgacggtgaccctgccggcgtggtgctgacctgcgacgcgctggaccgccccaccctg
gaacgcgtggtggcgtcgaagatcgaagtcaacgccggctccatcgacatgctgcaccaa
ctgggtgagcgctcgcccggccaccgcgtgtggatccgcatcaacccgggcttcggccat
ggccacagccgcaagaccaataccggcggcgaaaacagcaagcatggcatctggcacgaa
gagctggacgaggcgctggcgtgcatcaaggcccatggcctgcacctggtgggcgtgcac
atgcacattggctccggggtggactaccagcacctggaacaggtggcccgctcgatgatc
gagctgatcggccgcctgggcgtggacatcgaggcgttctccatcggcggcggcctttcc
accccttaccgcagcaccgacaaaccggtcgacctgcagcgttatgcgcagacctgggcg
gtggcgcgcaaggagatcgaagcgatgctcggccacccggtgcgcatggagatcgaaccc
gggcgcttcctggtggcggagtcgggctatctggtggccgaagtccgtgccgtgaaacag
gtggggcgcaataccttcgtcattatcgacgccggcttcaacgacctgatgcgcccggcg
atgtacggcgcctaccacggcatgaccctgctcgatgccgatggccaggcagtagatcgc
ccgcgccagccgaccgtggtggccgggccgttgtgtgaatcgggtgacgtgttcacccag
gatgaccaggcactgaccccgcaggacctgccccaggcacaggtgggcgacctgctggtg
atccacgatgccggggcctatggcgcgtcgatgtcgtcgaactacaacagccggccgctg
ctgccggagttcctgatcgagaacggtgccctgcggatgatccgccggcggcagacggtg
caggacctgctgagcctggaggcggatttctaa
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