Pseudomonas putida KT2440: PP_2303
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Entry
PP_2303 CDS
T00114
Symbol
hupB
Name
(GenBank) DNA binding regulator, beta subunit B
KO
K03530
DNA-binding protein HU-beta
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppu03032
]
PP_2303 (hupB)
03036 Chromosome and associated proteins [BR:
ppu03036
]
PP_2303 (hupB)
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_2303 (hupB)
DNA replication proteins [BR:
ppu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PP_2303 (hupB)
Chromosome and associated proteins [BR:
ppu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PP_2303 (hupB)
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PP_2303 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Barstar
Motif
Other DBs
NCBI-ProteinID:
AAN67916
UniProt:
Q88KI7
LinkDB
All DBs
Position
2633085..2633357
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKQGDDVVLVGFGTFSVKERAERTG
RNPQTGKAIKIEAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgccgcatctgcagacatcccgaaagctgta
gccggccgtgcgctggacgcagtcatcgaatccgtcaccggcgccctgaagcaaggtgac
gatgtggtactggttggctttggtaccttctcggtcaaggagcgcgccgagcgtactggc
cgcaacccgcaaaccggcaaggcaatcaagatcgaagccgccaaggttccaggtttcaag
gccggcaaaggcctgaaagacgccgtcaactaa
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