Pseudomonas putida KT2440: PP_2707
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Entry
PP_2707 CDS
T00114
Name
(GenBank) putative Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PP_2707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_2707
Enzymes [BR:
ppu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PP_2707
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PP_2707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AAN68315
UniProt:
Q88JE2
LinkDB
All DBs
Position
3097637..3098434
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AA seq
265 aa
AA seq
DB search
MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH
GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLPNGNPLPGPK
FDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACY
QRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGVDA
WVRNQAKASDHAPVWIELGTRRARS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctgaagattgccaccttcaacatcaatggcatccgcagccgcttgccggcg
ctgctggcctggctggagcgggagcagcccgacattgcctgcctgcaggagctgaaggcg
gccgatcagcagttccctcgcgcagagctggaggcagcaggctatggcagccttcatcat
gggcaaccgtcatggaacggcgtggccattctggtgcggggcagtgatccgctcgaggtt
cgccgcggcttgcccggcctggaagaggacagccagagccgctatctggaagctgcggca
cacggggtgttggtcgcttgtctctatctgccgaacggcaacccgctgcccgggcccaag
ttcgattacaagctgcactggttcgaatgcctgatccagcatgcgcgcagcctccaggaa
agtggccaccccacgctgctggcaggggatttcaatgtcgtgcccaccgacatggacatc
tataacccgcgttcctggctgaaggacgcactgctgcagcctgagtcgcgagcgtgttac
caacgactgcttgaccagggctggctcgatgccatacgccatctgtacccggacgagcgt
gtctacaccttctgggactattttcgtaaccactgggcccgcaatgccgggttgcgaatc
gatcacctgttgctcaatcgcgagcttgcgccttatctgaaacgggcgggtgtcgatgca
tgggtgcgcaaccaggccaaggccagcgaccatgcgcccgtctggatcgagctgggtacg
cgtcgtgctcggtcatag
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